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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 31-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae 670-6B
  • locus tag: SP670_1120 [new locus tag: SP670_RS05535 ]
  • pan locus tag?: PNEUPAN002334000
  • symbol: SP670_1120
  • pan gene symbol?: mobC
  • synonym:
  • product: bacterial mobilization protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SP670_1120 [new locus tag: SP670_RS05535 ]
  • symbol: SP670_1120
  • product: bacterial mobilization protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1043824..1044189
  • length: 366
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: CP002176 (1043824..1044189) NCBI
  • BioCyc: see SP670_RS05535
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGGAAAATCGTTACCGAACTAAGCTAAAGAAAGTTTTCCTATCTGATAGCGAATTGAGT
    CAGTTGAAACATTGCATCGATCAAAGCGGTTGTCAATCTTTTTCAGAATATGCTCGACGA
    ACCCTACTTGACCCTGGTATGAATTTCATCACCATTGATACAACTGGTTATCAAGATTTG
    ATATTTGAGTTGAAGAGGATTGGTAATAACATCAACCAGATTGCCCGAAGTGTTAATCAA
    TCTCAGTTGATTTCAAGTGAAGAATTGCAAGACTTGAAAAAGGGAATCGCTGACTTGATA
    AGTGAGGTAGAGAAAGAGTTTAGTGTTCAAGCAAAAAAGTTGAGGGAGTTTTATGGTCAT
    CACTAA
    60
    120
    180
    240
    300
    360
    366

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SP670_1120 [new locus tag: SP670_RS05535 ]
  • symbol: SP670_1120
  • description: bacterial mobilization protein
  • length: 121
  • theoretical pI: 7.50694
  • theoretical MW: 14016.8
  • GRAVY: -0.581818

⊟Function[edit | edit source]

  • TIGRFAM:
    Signal transduction Regulatory functions DNA interactions CRISPR locus-related DNA-binding protein (TIGR01884; HMM-score: 12.5)
  • TheSEED  :
    • Tn5252, Orf 9 protein
  • ⊞PFAM:
    Met_repress (CL0057) MobC; Bacterial mobilisation protein (MobC) (PF05713; HMM-score: 47.3)
    and 3 more
    MobC_2; MobC-like protein (PF19514; HMM-score: 24.5)
    no clan defined DUF1533; Protein of unknown function (DUF1533) (PF07550; HMM-score: 16.2)
    SNARE-fusion (CL0445) Syntaxin_2; Syntaxin-like protein (PF14523; HMM-score: 14.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007499
    • TAT(Tat/SPI): 0.000308
    • LIPO(Sec/SPII): 0.007562
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: ADM91183 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MENRYRTKLKKVFLSDSELSQLKHCIDQSGCQSFSEYARRTLLDPGMNFITIDTTGYQDLIFELKRIGNNINQIARSVNQSQLISSEELQDLKKGIADLISEVEKEFSVQAKKLREFYGHH

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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