PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae 670-6B
- locus tag: SP670_1671 [new locus tag: SP670_RS08280 ]
- pan locus tag?: PNEUPAN002971000
- symbol: SP670_1671
- pan gene symbol?: merA
- synonym:
- product: probable pyridine nucleotide-disulfide oxidoreductase YkgC
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SP670_1671 [new locus tag: SP670_RS08280 ]
- symbol: SP670_1671
- product: probable pyridine nucleotide-disulfide oxidoreductase YkgC
- replicon: chromosome
- strand: +
- coordinates: 1560369..1561685
- length: 1317
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP002176 (1560369..1561685) NCBI
- BioCyc: see SP670_RS08280
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1415 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1261ATGTTAACATACGATTTAATTGTTATTGGATTTGGTAAAGCTGGTAAAACACTAGCAGGT
AAATTGGCTTCAGCTGGCAAAAAAGTTGCCCTCGTTGAACGCAGCAAGGCTATGTACGGT
GGAACTTGTATCAACATTGGTTGTATCCCAACTAAAACCTTGCTAGTTGCTGCTGAGAAA
GACTTGTCTTTTGAAGAAGTCATTTCTACCAAAAACACGATCACTGGTCGCCTCAACGGT
AAAAACTATACGACTGTTGCTGGTACTGGCGTCGATATCTTTGATGCTGAAGCTCACTTC
CTTTCAAATAAAGTCATCGAAATCCAAGCTGGTGATGAAAAACAAGAATTGACTGCTGAA
ACTATCGTCATCAACACTGGTGCTGTTTCAAACGTCTTGCCAATCCCTGGACTTGCTACA
AGCAAAAACGTCTTTGACTCAACAGGTATCCAAAGCTTGGATAAATTGCCTGAAAAACTT
GGAGTCCTTGGTGGCGGAAATATCGGTCTTGAATTTGCTGGCCTTTACAATAAACTAGGA
AGCAAGGTTACAGTCCTAGATGCCTTGGATACATTCCTACCTCGTGCAGAACCTTCCATC
GCAGCTCTTGCTAAACAATACATGGAAGAAGACGGTATTGAATTGCTTCAAAATATCCAT
ACTACTGAAATTAAAAACGACGGTGACCAAGTGCTTGTCGTAACTGAAGACGAAACTTAC
CGTTTCGACGCCCTTCTCTACGCAACTGGACGCAAACCAAATGTAGAACCACTTCAACTT
GAAAATACAGATATTGAACTAACTGAACGTGGCGCTATTAAAGTAGATAAACACTGTCAA
ACAAACGTTCCTGGTGTCTTTGCAGTTGGAGATGTCAACGGTGGTCTTCAATTTACTTAC
ATTTCACTTGATGACTTCCGTGTTGTTTACAGCTACCTTGCTGGAGATGGCAACTACACA
CTTGAGGACCGTCTCAATGTGCCAAATACTATGTTCATCACACCTGCACTTTCACAAGTT
GGTTTGACTGAAAGCCAAGCAGCTGATTTGAAACTTCCATACGCAGTGAAAGAAATCCCT
GTTACAGCCATGCCTCGTGGTCACGTAAATGGAGACCTTCGCGGAGCTTTCAAAGCTGTT
GTTAATACTGAAACAAAAGAAATTCTTGGTGCAAGCATCTTCTCAGAAGGTTCTCAAGAA
ATCATCAACATCATTACTGTTGCTATGGACAACAAGATTCCTTACACTTACTTCACAAAA
CAAATCTTCACTCACCCAACCTTGGCTGAGAACTTGAATGACTTGTTTGCGATTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SP670_1671 [new locus tag: SP670_RS08280 ]
- symbol: SP670_1671
- description: probable pyridine nucleotide-disulfide oxidoreductase YkgC
- length: 438
- theoretical pI: 4.57155
- theoretical MW: 47235.5
- GRAVY: 0.00547945
⊟Function[edit | edit source]
- ⊞TIGRFAM: dihydrolipoyl dehydrogenase (TIGR01350; EC 1.8.1.4; HMM-score: 319.8)Cellular processes Detoxification mercury(II) reductase (TIGR02053; EC 1.16.1.1; HMM-score: 297.4)and 42 more
- ⊞TheSEED :
- Mercuric ion reductase (EC 1.16.1.1)
- PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase
- Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Virulence, Disease and Defense Resistance to antibiotics and toxic compounds Mercuric reductase Mercuric ion reductase (EC 1.16.1.1)and 2 more - ⊞PFAM: NADP_Rossmann (CL0063) Pyr_redox_2; Pyridine nucleotide-disulphide oxidoreductase (PF07992; HMM-score: 201.5)and 24 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADM91727 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MLTYDLIVIGFGKAGKTLAGKLASAGKKVALVERSKAMYGGTCINIGCIPTKTLLVAAEKDLSFEEVISTKNTITGRLNGKNYTTVAGTGVDIFDAEAHFLSNKVIEIQAGDEKQELTAETIVINTGAVSNVLPIPGLATSKNVFDSTGIQSLDKLPEKLGVLGGGNIGLEFAGLYNKLGSKVTVLDALDTFLPRAEPSIAALAKQYMEEDGIELLQNIHTTEIKNDGDQVLVVTEDETYRFDALLYATGRKPNVEPLQLENTDIELTERGAIKVDKHCQTNVPGVFAVGDVNGGLQFTYISLDDFRVVYSYLAGDGNYTLEDRLNVPNTMFITPALSQVGLTESQAADLKLPYAVKEIPVTAMPRGHVNGDLRGAFKAVVNTETKEILGASIFSEGSQEIINIITVAMDNKIPYTYFTKQIFTHPTLAENLNDLFAI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1415 PneumoExpress