PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_0972 [new locus tag: SPG_RS04900 ]
- pan locus tag?: PNEUPAN002138000
- symbol: SPG_0972
- pan gene symbol?: nplT
- synonym:
- product: neopullulanase, putative
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_0972 [new locus tag: SPG_RS04900 ]
- symbol: SPG_0972
- product: neopullulanase, putative
- replicon: chromosome
- strand: +
- coordinates: 935117..936244
- length: 1128
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001015 (935117..936244) NCBI
- BioCyc: see SPG_RS04900
- MicrobesOnline: 5756241 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_0927 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1021
1081ATGGAATTGAGTGCTATTTACCATAGGCCTGAGTCGGAGTATGCCTATCTTTATAAGGAT
NAGAAACTCCATATTCGAATTCGAACTAAGAAAGGGGACATTGAAAGCATCAACTTGCAC
TATGGGGACCCTTTTATCTTTATGGAGGAGTTTTATCAGGATACAAAAGAAATGGTCAAG
ATAACTTCTGGTACCTTATTTGACCATTGGCAGGTTGAAGTGTCAGTTGACTTTGCACGT
ATCCAGTATCTCTTTGAGCTCAGAGATACAGAAGGTCAAAATATTTTGTATGGCGATAAA
GGGTGTGTGGAAAATTCTCTAGAAAATCTTCATGCAATTGGGAATGGATTTAAGTTGCCT
TATCTTCATGAGATTGATGCCTGCAAGGTTCCTGACTGGGTTTCAAATACGGTATGGTAT
CAGATATTTCCTGAAAGATTTGCCAATGGCAATGCTCTATTAAACCCAGAAGGGACTTTA
GACTGGGATTCATCTGTCACACCTAAGAGCGATGATTTCTTTGGTGGTGATTTACAGGGG
ATTATTGATCATATGGATTACTTGCAAGACTTGGGTATTACTGGACTATATCTTTGTCCC
ATCTTTGAATCTACAAGCAATCACAAGTACAATACGACAGATTACTTTGAAATTGACCGT
CATTTTGGAGACAAGGAGACCTTTCGGGAACTGGTGGATCAAGCGCATCATCGTGGCATG
AAAGTCATGCTGGATGCGGTATTTAATCATATTGGTTCGCAATCTCTTCAATGGAAAAAT
GTCGTCAAAAATGGTGAACAGTCTGCTTATAAGGATTGGTTCCATATTCAACAATTCCCA
GTGACAACTGAAAAGCTAGTTAATAAGAGAGACTTACCCTATCATGTTTTTGGTTTCGAG
GACTATATGCCTAAGCTAAATACAGCCAATCCAGAGGTCAAGAATTATCTTTTAAAGGTT
GCGACTTATTGGATTGAAGAGTTTAATATCGATGCTTGGCGTTTGGATGTGGCTAATGAG
ATTGACCATCAGTTCTGGAAGGATTTTCGTAAGGCAGTTTTAGCTAAAAATCCTGATCTT
TTCGAGATTATAAAAAATATAAAGAATCTAGTCATAAATTTGAATTGA60
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1128
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_0972 [new locus tag: SPG_RS04900 ]
- symbol: SPG_0972
- description: neopullulanase, putative
- length: 375
- theoretical pI: 4.98995
- theoretical MW: 43941.2
- GRAVY: -0.472727
⊟Function[edit | edit source]
- ⊞reaction: EC 3.2.1.135? ExPASy
- ⊞TIGRFAM: alpha,alpha-phosphotrehalase (TIGR02403; EC 3.2.1.93; HMM-score: 100.7)Energy metabolism Biosynthesis and degradation of polysaccharides trehalose synthase (TIGR02456; EC 5.4.99.16; HMM-score: 85)Energy metabolism Biosynthesis and degradation of polysaccharides malto-oligosyltrehalose synthase (TIGR02401; EC 5.4.99.15; HMM-score: 84.1)Energy metabolism Biosynthesis and degradation of polysaccharides malto-oligosyltrehalose trehalohydrolase (TIGR02402; EC 3.2.1.141; HMM-score: 83.6)and 6 more
- TheSEED :
- Neopullulanase (EC 3.2.1.135)
- ⊞PFAM: Glyco_hydro_tim (CL0058) Alpha-amylase; Alpha amylase, catalytic domain (PF00128; HMM-score: 178.3)and 4 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACF55830 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MELSAIYHRPESEYAYLYKDXKLHIRIRTKKGDIESINLHYGDPFIFMEEFYQDTKEMVKITSGTLFDHWQVEVSVDFARIQYLFELRDTEGQNILYGDKGCVENSLENLHAIGNGFKLPYLHEIDACKVPDWVSNTVWYQIFPERFANGNALLNPEGTLDWDSSVTPKSDDFFGGDLQGIIDHMDYLQDLGITGLYLCPIFESTSNHKYNTTDYFEIDRHFGDKETFRELVDQAHHRGMKVMLDAVFNHIGSQSLQWKNVVKNGEQSAYKDWFHIQQFPVTTEKLVNKRDLPYHVFGFEDYMPKLNTANPEVKNYLLKVATYWIEEFNIDAWRLDVANEIDHQFWKDFRKAVLAKNPDLFEIIKNIKNLVINLN
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0927 PneumoExpress