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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-DEC-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae MDRSPN001
- locus tag: MDRSPN_RS08055 [old locus tag: MDRSPN_01539 ]
- pan locus tag?: PNEUPAN003248000
- symbol: MDRSPN_RS08055
- pan gene symbol?: —
- synonym:
- product: ATP-binding protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: MDRSPN_RS08055 [old locus tag: MDRSPN_01539 ]
- symbol: MDRSPN_RS08055
- product: ATP-binding protein
- replicon: chromosome
- strand: -
- coordinates: 1553999..1555033
- length: 1035
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_AP018391 (1553999..1555033) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1021ATGAAAAAATCAGATGTTCTTGATTTAATAAAGTATCATTATGAGGGCAGAGAGACAGAA
TTTAGAAATCAATCCATAGCAATTGCTCGGAACTTCAATAAACATGGTGATACACAAATA
GCACAATATATTATGGGGTTAATGTCTCAAAGTGATAGATTCATGCCACAAATAGAAAAT
CCTAGTGAGTATTTGACTCCTGCTAAACTAGATATTGGTCCTCTCCCATTGCCTCTTTCA
ATTATGAATGATTTAAAAGGAATAATAAACGCTGTCAATCATCATATTGGAATAAATAAA
TTTTTATTTGTGGGATCTCCAGGTACTGGAAAAACTGAAAGTGTAAAGCAGGTGGCTAGA
CTTATTGGCAAGGAATTACTTGTAGTAGATTTCAGTCACTTAGTAGATAGTAAGCTAGGG
CAAACAGTCAAAAACTTAGCAACTCTTTTTAATGAAATCAATAATCTTCCTTTCAAGCAA
AATTATATCATCCTATTTGATGAAATTGATTCCATAGTGTTGGATAGGGTTAATCAGAAT
GATTTAAGAGAAATGGGACGAGTGACTTCTGCCTTTTTAAAGGAGTTGGATAGGCTGTCA
CCAGAAATTGTATTAATTGCAACAACAAATCTTTTTGAAAATCTTGATAAAGCAGTTACG
AGAAGATTCGATGCCATAATTGACTTTGACCGTTATACTGATGAAGATAAAGTAGAAGTA
GCTACTATTATTTTAAATGAGTTATTAAAGCAATTTAAGAATGTAGCTAGAGATTTAAAA
TTATTTAAAAAAATTATCAATAGTGCCAATGTAATACCGAATCCTGGTGATTTGAGAAAC
TCAATAAGAACGTCATTGGCATTTAGTGATCCATCAGATCCGCATGATTACCAAAAACGC
CTGCTAAGAAGTTTGCATAATGGTAGAAATTTATCTATTTCTAAATTATCGAAGCTAGGT
TTTACTGTTAGAGAAATTGAGATTTTGACAGGTGTTTCTAAGAGTAGTGTATCACGAGAG
TTAAGCGAGGATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: MDRSPN_RS08055 [old locus tag: MDRSPN_01539 ]
- symbol: MDRSPN_RS08055
- description: ATP-binding protein
- length: 344
- theoretical pI: 7.92881
- theoretical MW: 39011.5
- GRAVY: -0.259302
⊟Function[edit | edit source]
- reaction: EC 3.6.1.-? ExPASy
- ⊞TIGRFAM: 26S proteasome subunit P45 family (TIGR01242; HMM-score: 43.3)AAA family ATPase, CDC48 subfamily (TIGR01243; HMM-score: 41.6)Cellular processes Cell division ATP-dependent metallopeptidase HflB (TIGR01241; EC 3.4.24.-; HMM-score: 36.3)Protein fate Degradation of proteins, peptides, and glycopeptides ATP-dependent metallopeptidase HflB (TIGR01241; EC 3.4.24.-; HMM-score: 36.3)and 7 more
- TheSEED:
- ⊞PFAM: P-loop_NTPase (CL0023) AAA; ATPase family associated with various cellular activities (AAA) (PF00004; HMM-score: 91)and 17 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000747916 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKKSDVLDLIKYHYEGRETEFRNQSIAIARNFNKHGDTQIAQYIMGLMSQSDRFMPQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTESVKQVARLIGKELLVVDFSHLVDSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVLDRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFENLDKAVTRRFDAIIDFDRYTDEDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDPHDYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: