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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SP670_2273 [new locus tag: SP670_RS11560 ]
  • symbol: SP670_2273
  • product: ascorbate-specific PTS system enzyme IIC
  • replicon: chromosome
  • strand: -
  • coordinates: 2116990..2118336
  • length: 1347
  • essential: unknown

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGATGAAGTTCATATTGGATATTGTTAGTACACCAGCTATTTTAGTAGCTTTAATTGCA
    ATCTTAGGATTAGTTCTTCAGAAGAAGAAATTACCTGATATTATTAAAGGTGGAATTAAG
    ACCTTTGTTGGTTTCTTAGTTGTATCTGGTGGTGCAGGAATTGTACAAAATTCTTTAAAT
    CCATTTGGTACCATGTTTGAGCATGCTTTTCATTTATCTGGCGTTGTGCCGAATAATGAA
    GCAATTGTAGCTGTAGCTTTAACAACATATGGCTCAGCTACTGCAATGATTATGTTTGCA
    GGCATGGTGTTCAATATCTTAATCGCTCGTTTTACTCGATTTAAATATATTTTTTTAACA
    GGGCACCACACTCTATATATGGCATGTATGATTGCGGTCATTTTATCAGTTGCTGGCTTT
    ACTAGTTTGCCTCTCATCTTACTAGGAGGATTAGCACTCGGTATTATTATGAGTATTTCC
    CCAGCATTTATGCAAAAATATATGGTTCAATTAACTGGAAATGACAAGGTGGCTTTAGGT
    CATTTCAGTTCTTTGGGATATTGGTTGAGTGGTTTTACTGGTAGCCTTATCGGTGACAAA
    TCAAAATCAACAGAGGACATTAAATTTCCAAAGAGTTTAGCTTTTTTACGTGATAGTACT
    GTTAGTATCACTTTATCCATGGCAGTTATTTACATTATTGTAGCTATCTTTGCAGGGTCA
    GAATATATAGAAAAAGAAATCAGTAGTGGTACAAGTGGTCTAGTTTATGCTTTACAATTA
    GCAGGTCAATTTGCAGCAGGGGTATTTGTTATTTTAGCAGGTGTTCGCCTTATTTTGGGT
    GAAATTGTTCCAGCCTTTAAAGGTATTTCAGAGCGTCTTGTACCTAATTCAAAACCTGCT
    TTGGATTGTCCGATTGTTTATACTTATGCACCCAATGCAGTTCTAATTGGATTTATCTCT
    AGTTTTGTTGGTGGTTTAGTAAGTATGGCAATTATGATTGCTTCAGGAACGGTTGTTATC
    TTACCAGGTGTTGTGCCTCATTTCTTCTGTGGAGCGACTGCAGGTGTCATTGGGAATGCA
    TCTGGTGGTGTTCGTGGAGCCACTATTGGAGCATTTTTACAAGGTATTTTAATCAGTTTT
    CTTCCAGTCTTTTTAATGCCAGTTTTGGGAGGACTTGGTTTCCAAGGATCAACTTTCTCA
    GATGCAGATTTTGGTCTATCAGGAATTATTTTAGGAATGTTAAATCAATTTGGCTCACAA
    GCAGGCATTGTGATTGGTCTTGTTCTTATTCTAGCAGTTATGTTTGGAGTATCCTTTATT
    AAAAAGCCATCTGCAAAGGAGGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1347

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SP670_2273 [new locus tag: SP670_RS11560 ]
  • symbol: SP670_2273
  • description: ascorbate-specific PTS system enzyme IIC
  • length: 448
  • theoretical pI: 9.41441
  • theoretical MW: 46879.7
  • GRAVY: 0.97567

Function[edit | edit source]

  • TIGRFAM:
    Unknown function Enzymes of unknown specificity F420-dependent oxidoreductase, MSMEG_4879 family (TIGR03564; EC 1.-.-.-; HMM-score: 12.6)
  • TheSEED  :
    • Transport protein SgaT, putative
  • PFAM:
    no clan defined EIIC-GAT; PTS system sugar-specific permease component (PF03611; HMM-score: 488.3)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 11
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.03824
    • TAT(Tat/SPI): 0.000517
    • LIPO(Sec/SPII): 0.01729
  • predicted transmembrane helices (TMHMM): 11

Accession numbers[edit | edit source]

  • GI:
  • RefSeq: ADM92323 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MMKFILDIVSTPAILVALIAILGLVLQKKKLPDIIKGGIKTFVGFLVVSGGAGIVQNSLNPFGTMFEHAFHLSGVVPNNEAIVAVALTTYGSATAMIMFAGMVFNILIARFTRFKYIFLTGHHTLYMACMIAVILSVAGFTSLPLILLGGLALGIIMSISPAFMQKYMVQLTGNDKVALGHFSSLGYWLSGFTGSLIGDKSKSTEDIKFPKSLAFLRDSTVSITLSMAVIYIIVAIFAGSEYIEKEISSGTSGLVYALQLAGQFAAGVFVILAGVRLILGEIVPAFKGISERLVPNSKPALDCPIVYTYAPNAVLIGFISSFVGGLVSMAIMIASGTVVILPGVVPHFFCGATAGVIGNASGGVRGATIGAFLQGILISFLPVFLMPVLGGLGFQGSTFSDADFGLSGIILGMLNQFGSQAGIVIGLVLILAVMFGVSFIKKPSAKEE

Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

Expression data[edit | edit source]

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]

NCBI: 31-JAN-2014

Summary[edit | edit source]

  • organism: Streptococcus pneumoniae 670-6B
  • locus tag: SP670_2273 [new locus tag: SP670_RS11560 ]
  • pan locus tag?: PNEUPAN003676000
  • symbol: SP670_2273
  • pan gene symbol?: ulaA2
  • synonym:
  • product: ascorbate-specific PTS system enzyme IIC

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SP670_2273 [new locus tag: SP670_RS11560 ]
  • symbol: SP670_2273
  • product: ascorbate-specific PTS system enzyme IIC
  • replicon: chromosome
  • strand: -
  • coordinates: 2116990..2118336
  • length: 1347
  • essential: unknown

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGATGAAGTTCATATTGGATATTGTTAGTACACCAGCTATTTTAGTAGCTTTAATTGCA
    ATCTTAGGATTAGTTCTTCAGAAGAAGAAATTACCTGATATTATTAAAGGTGGAATTAAG
    ACCTTTGTTGGTTTCTTAGTTGTATCTGGTGGTGCAGGAATTGTACAAAATTCTTTAAAT
    CCATTTGGTACCATGTTTGAGCATGCTTTTCATTTATCTGGCGTTGTGCCGAATAATGAA
    GCAATTGTAGCTGTAGCTTTAACAACATATGGCTCAGCTACTGCAATGATTATGTTTGCA
    GGCATGGTGTTCAATATCTTAATCGCTCGTTTTACTCGATTTAAATATATTTTTTTAACA
    GGGCACCACACTCTATATATGGCATGTATGATTGCGGTCATTTTATCAGTTGCTGGCTTT
    ACTAGTTTGCCTCTCATCTTACTAGGAGGATTAGCACTCGGTATTATTATGAGTATTTCC
    CCAGCATTTATGCAAAAATATATGGTTCAATTAACTGGAAATGACAAGGTGGCTTTAGGT
    CATTTCAGTTCTTTGGGATATTGGTTGAGTGGTTTTACTGGTAGCCTTATCGGTGACAAA
    TCAAAATCAACAGAGGACATTAAATTTCCAAAGAGTTTAGCTTTTTTACGTGATAGTACT
    GTTAGTATCACTTTATCCATGGCAGTTATTTACATTATTGTAGCTATCTTTGCAGGGTCA
    GAATATATAGAAAAAGAAATCAGTAGTGGTACAAGTGGTCTAGTTTATGCTTTACAATTA
    GCAGGTCAATTTGCAGCAGGGGTATTTGTTATTTTAGCAGGTGTTCGCCTTATTTTGGGT
    GAAATTGTTCCAGCCTTTAAAGGTATTTCAGAGCGTCTTGTACCTAATTCAAAACCTGCT
    TTGGATTGTCCGATTGTTTATACTTATGCACCCAATGCAGTTCTAATTGGATTTATCTCT
    AGTTTTGTTGGTGGTTTAGTAAGTATGGCAATTATGATTGCTTCAGGAACGGTTGTTATC
    TTACCAGGTGTTGTGCCTCATTTCTTCTGTGGAGCGACTGCAGGTGTCATTGGGAATGCA
    TCTGGTGGTGTTCGTGGAGCCACTATTGGAGCATTTTTACAAGGTATTTTAATCAGTTTT
    CTTCCAGTCTTTTTAATGCCAGTTTTGGGAGGACTTGGTTTCCAAGGATCAACTTTCTCA
    GATGCAGATTTTGGTCTATCAGGAATTATTTTAGGAATGTTAAATCAATTTGGCTCACAA
    GCAGGCATTGTGATTGGTCTTGTTCTTATTCTAGCAGTTATGTTTGGAGTATCCTTTATT
    AAAAAGCCATCTGCAAAGGAGGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1347

This data comes from external databases and cannot be edited.

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SP670_2273 [new locus tag: SP670_RS11560 ]
  • symbol: SP670_2273
  • description: ascorbate-specific PTS system enzyme IIC
  • length: 448
  • theoretical pI: 9.41441
  • theoretical MW: 46879.7
  • GRAVY: 0.97567

Function[edit | edit source]

  • TIGRFAM:
    Unknown function Enzymes of unknown specificity F420-dependent oxidoreductase, MSMEG_4879 family (TIGR03564; EC 1.-.-.-; HMM-score: 12.6)
  • TheSEED  :
    • Transport protein SgaT, putative
  • PFAM:
    no clan defined EIIC-GAT; PTS system sugar-specific permease component (PF03611; HMM-score: 488.3)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 11
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.03824
    • TAT(Tat/SPI): 0.000517
    • LIPO(Sec/SPII): 0.01729
  • predicted transmembrane helices (TMHMM): 11

Accession numbers[edit | edit source]

  • GI:
  • RefSeq: ADM92323 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MMKFILDIVSTPAILVALIAILGLVLQKKKLPDIIKGGIKTFVGFLVVSGGAGIVQNSLNPFGTMFEHAFHLSGVVPNNEAIVAVALTTYGSATAMIMFAGMVFNILIARFTRFKYIFLTGHHTLYMACMIAVILSVAGFTSLPLILLGGLALGIIMSISPAFMQKYMVQLTGNDKVALGHFSSLGYWLSGFTGSLIGDKSKSTEDIKFPKSLAFLRDSTVSITLSMAVIYIIVAIFAGSEYIEKEISSGTSGLVYALQLAGQFAAGVFVILAGVRLILGEIVPAFKGISERLVPNSKPALDCPIVYTYAPNAVLIGFISSFVGGLVSMAIMIASGTVVILPGVVPHFFCGATAGVIGNASGGVRGATIGAFLQGILISFLPVFLMPVLGGLGFQGSTFSDADFGLSGIILGMLNQFGSQAGIVIGLVLILAVMFGVSFIKKPSAKEE

Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

Expression data[edit | edit source]

Biological Material[edit | edit source]

This data comes from external databases and cannot be edited.

Other Information[edit | edit source]

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]