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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 03-SEP-2019
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ASP0581
- locus tag: ASP0581_18020 [new locus tag: EL334_RS09545 ]
- pan locus tag?: PNEUPAN003378000
- symbol: dexS
- pan gene symbol?: treC
- synonym:
- product: alpha,alpha-phosphotrehalase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: ASP0581_18020 [new locus tag: EL334_RS09545 ]
- symbol: dexS
- product: alpha,alpha-phosphotrehalase
- replicon: chromosome
- strand: -
- coordinates: 1775312..1776937
- length: 1626
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: AP019192 (1775312..1776937) NCBI
- BioCyc: see EL334_RS09545
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1663 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1621ATGACACTTGATAAAGGAAAAGTAGTCTATCAAATCTATCCAAAATCTTACAAAGACACC
ACTGGCAATGGTATTGGGGATTTCCGTGGGATTATCGGAAAAATTCCCTATCTAGCCAAA
CTAGGTGTGGATATGGTCTGGCTCAATCCATTCTATCCAAGCCCTCAACGGGATAATGGT
TACGATATTTCAGATTATATGGCAGTGGATCCTCTTTTTGGTGATATGGCTGATTTTGAG
AAAATGGTGTGTGTCGGTAAAGAGCACAAGATTGACTTTATGCTGGACATGGTACTTAAT
CATTGTTCGACAGAGCATGAATGGTTTCAGAAAGCCCTAGCTGGTGATAAGTATTATCAA
GACTTTTTCTTCATCCAAGACCAACCAACAGATTGGCAGTCTAAGTTTGGTGGTTCTGCA
TGGACGCCTTTCGGGGATACTGGGAAATACTATCTTCACCTATTTGATGAGACCCAGGCT
GACCTTAACTGGCGCAATTCCAATGTCCGTAAGGAGCTTTTCAAGGTTGTTAATTTCTGG
CGCGACAAGGGTGTCAAAGGTTTCCGATTTGATGTGATCAATTTGATCGGTAAGGACGAG
GTTTCAGTGGACTGTCCTGAAAATGAAGGGAAGCCAGCTTATACAGACAAACCCATCGTT
CATAACTATTTGCGTATGATGAACCAAGCCACTTTTGGATCTGACGATAGCTTTATGACA
GTTGGGGAAATGTCTTCTACCACCATGGAAAACTGTGTCCTCTATTCGTCGCCTGATCGT
CAGGAATTATCCATGACCTTTAATTTTCATCACCTCAAGGTGGACTATAAGGATGGACAA
AAGTGGACCTTGGCTCCCTTTGATTTTGAAGAGTTGAAGAGTCTTTACCATAGTTGGGGT
AAGGAAATGAGTGATAAAGACGGTTGGAGTGCCCTCTTTTGGAATAATCACGATCAACCA
CGTGCCTTGAACCGTTTTGTCGATATTCAAAACTTCCGCAAGGAAGGAGCCACCATGCTA
GCAGCCAGCATTCACCTGTCACGTGGGACACCTTATATCTACATGGGTGAGGAAATCGGG
ATGATTGACCCAGACTATGATTCTATGGCTGATTATGTGGATGTCGAATCGCTTAATGCC
TATCAGATGCTCTTAGAAGAAGGAAAGAGTCAGCAAGAAGCCTTCCAGATTATTCAAGCT
AAGTCGCGTGATAATTCACGCATTCCCATGCAGTGGGATGCTTCGGAAAATGCAGGATTT
TCAACAGGCACTCCATGGTTGAAAGCTGGTAAATCCTATAAAGATATCAATGTAGAAAAT
GAAATCAAAGGTCCGATTTTCACCTTCTATCAAGACTTGATTCGACTGCGTAAGGAAATG
CCAATCATTTCAGAAGGAAATTACAAACCAGCCTTTGAAGATAGCAAACAAGTCTACGCT
TTTGAACGCCAGTTTGAGGATCAAAAGTTACTAGTGCTCAATAACTTTTATGCCAAAGAA
GTGGAAATCGACTTGCCAGCAGTCTACCAAAATGGACAGATTTTGATTTCAAACTATAAA
GATGCAGAAGTGTCTGAGAAAATTCTACTCAAACCCTATCAAACACTGGCTATTTATGTA
AATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: ASP0581_18020 [new locus tag: EL334_RS09545 ]
- symbol: DexS
- description: alpha,alpha-phosphotrehalase
- length: 541
- theoretical pI: 4.70668
- theoretical MW: 62680.3
- GRAVY: -0.540111
⊟Function[edit | edit source]
- ⊞TIGRFAM: alpha,alpha-phosphotrehalase (TIGR02403; EC 3.2.1.93; HMM-score: 843.6)and 4 more
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- ⊞PFAM: Glyco_hydro_tim (CL0058) Alpha-amylase; Alpha amylase, catalytic domain (PF00128; HMM-score: 350.6)and 4 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: BBG82324 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTLDKGKVVYQIYPKSYKDTTGNGIGDFRGIIGKIPYLAKLGVDMVWLNPFYPSPQRDNGYDISDYMAVDPLFGDMADFEKMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQDFFFIQDQPTDWQSKFGGSAWTPFGDTGKYYLHLFDETQADLNWRNSNVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMTVGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWGKEMSDKDGWSALFWNNHDQPRALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQAKSRDNSRIPMQWDASENAGFSTGTPWLKAGKSYKDINVENEIKGPIFTFYQDLIRLRKEMPIISEGNYKPAFEDSKQVYAFERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYKDAEVSEKILLKPYQTLAIYVN
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1663 PneumoExpress