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From PneumoWiki
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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 15-OCT-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae P1031
  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • pan locus tag?: PNEUPAN001361000
  • symbol: SPP_RS02500
  • pan gene symbol?: salL
  • synonym:
  • product: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • symbol: SPP_RS02500
  • product: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 454667..455515
  • length: 849
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGAATAATAATTTACTGGTATTACAATCAGACTTTGGTCTGGTTGATGGTGCGGTATCG
    GCTATGATTGGAGTGGCTTTAGAAGAGTCTCCAACCTTAAAAATCCATCACTTGACGCAC
    GATATCACGCCTTATAATATTTTTGAGGGGAGCTATCGTCTCTTTCAGACGGTGGATTAC
    TGGCCTGAGGGAACGACGTTTGTATCGGTTGTCGATCCAGGTGTCGGTTCGAAACGTAAG
    AGTGTAGTTGCCAAGACTGCAAAAAATCAATACATTGTCACGCCAGATAATGGGACGCTT
    TCCTTTATCAAGAAACACGTTGGCATTGTAGCCATTCGTGAGATTTCTGAGGTGGCCAAT
    AGGCGTCAAAACACAGAGCATTCTTATACCTTCCACGGTCGTGATGTCTATGCCTATACT
    GGTGCTAAACTGGCCAGTGGTCACATTACTTTTGAGGAAGTAGGGCCAGAGCTCAGTGTG
    GAACAGATTGTAGAGCTTCCAGTCGTAGCGACCATCATAGAAGATCATCTGGTGAAGGGA
    GCCATTGATATTCTGGATGTGCGTTTCGGTTCGCTTTGGACCTCTATCACACGGGAAGAA
    TTTTACAAGCTGGAACCAGAATTTGGTGATCGTTTTGAAGTGACCATCTATCATGCTGAT
    ATGCTGGTCTATCAAAATCAGGTTGTCTATGGCAAATCATTTGCAGATGTGAGAATTGGG
    CAACCCATCCTTTACATCAACTCTCTCTATCGTTTAGGTTTGGCTATCAACCAAGGTTCC
    TTTGCCAAGGCCTATAATGTAGGTGTCGGTTCATCTTGGACCATTGAAATAAAGAAAATA
    GAAGGATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    849

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • symbol: SPP_RS02500
  • description: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
  • length: 282
  • theoretical pI: 5.81435
  • theoretical MW: 31450.5
  • GRAVY: -0.027305

⊟Function[edit | edit source]

  • ⊞⊞TIGRFAM:
    Cellular processes Cellular processes Biosynthesis of natural products adenosyl-fluoride synthase (TIGR04507; EC 2.5.1.63; HMM-score: 92.2)
    and 1 more
    Metabolism Amino acid biosynthesis Aspartate family O-succinylhomoserine (thiol)-lyase (TIGR02080; EC 2.5.1.48; HMM-score: 12)
  • TheSEED: see SPP_0506
  • ⊞⊞PFAM:
    no clan defined SAM_HAT_N; SAM hydroxide adenosyltransferase N-terminal domain (PF01887; HMM-score: 148.3)
    and 1 more
    SAM_HAT_C; SAM hydroxide adenosyltransferase C-terminal domain (PF20257; HMM-score: 65.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞⊞PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • ⊞⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.012687
    • TAT(Tat/SPI): 0.001515
    • LIPO(Sec/SPII): 0.002564
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001063601 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MNNNLLVLQSDFGLVDGAVSAMIGVALEESPTLKIHHLTHDITPYNIFEGSYRLFQTVDYWPEGTTFVSVVDPGVGSKRKSVVAKTAKNQYIVTPDNGTLSFIKKHVGIVAIREISEVANRRQNTEHSYTFHGRDVYAYTGAKLASGHITFEEVGPELSVEQIVELPVVATIIEDHLVKGAIDILDVRFGSLWTSITREEFYKLEPEFGDRFEVTIYHADMLVYQNQVVYGKSFADVRIGQPILYINSLYRLGLAINQGSFAKAYNVGVGSSWTIEIKKIEG

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://pneumowiki.med.uni-greifswald.de/index.php?title=SPP_RS02500&oldid=122617"
Insert paragraph

NCBI: 15-OCT-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae P1031
  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • pan locus tag?: PNEUPAN001361000
  • symbol: SPP_RS02500
  • pan gene symbol?: salL
  • synonym:
  • product: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein

Insert paragraph

⊟Genome View[edit | edit source]

Insert paragraph

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • symbol: SPP_RS02500
  • product: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 454667..455515
  • length: 849
  • essential: unknown

Insert paragraph

⊟Accession numbers[edit | edit source]

Insert paragraph

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGAATAATAATTTACTGGTATTACAATCAGACTTTGGTCTGGTTGATGGTGCGGTATCG
    GCTATGATTGGAGTGGCTTTAGAAGAGTCTCCAACCTTAAAAATCCATCACTTGACGCAC
    GATATCACGCCTTATAATATTTTTGAGGGGAGCTATCGTCTCTTTCAGACGGTGGATTAC
    TGGCCTGAGGGAACGACGTTTGTATCGGTTGTCGATCCAGGTGTCGGTTCGAAACGTAAG
    AGTGTAGTTGCCAAGACTGCAAAAAATCAATACATTGTCACGCCAGATAATGGGACGCTT
    TCCTTTATCAAGAAACACGTTGGCATTGTAGCCATTCGTGAGATTTCTGAGGTGGCCAAT
    AGGCGTCAAAACACAGAGCATTCTTATACCTTCCACGGTCGTGATGTCTATGCCTATACT
    GGTGCTAAACTGGCCAGTGGTCACATTACTTTTGAGGAAGTAGGGCCAGAGCTCAGTGTG
    GAACAGATTGTAGAGCTTCCAGTCGTAGCGACCATCATAGAAGATCATCTGGTGAAGGGA
    GCCATTGATATTCTGGATGTGCGTTTCGGTTCGCTTTGGACCTCTATCACACGGGAAGAA
    TTTTACAAGCTGGAACCAGAATTTGGTGATCGTTTTGAAGTGACCATCTATCATGCTGAT
    ATGCTGGTCTATCAAAATCAGGTTGTCTATGGCAAATCATTTGCAGATGTGAGAATTGGG
    CAACCCATCCTTTACATCAACTCTCTCTATCGTTTAGGTTTGGCTATCAACCAAGGTTCC
    TTTGCCAAGGCCTATAATGTAGGTGTCGGTTCATCTTGGACCATTGAAATAAAGAAAATA
    GAAGGATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    849

Insert paragraph

This data comes from external databases and cannot be edited.

Insert paragraph

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPP_RS02500 [old locus tag: SPP_0506 ]
  • symbol: SPP_RS02500
  • description: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
  • length: 282
  • theoretical pI: 5.81435
  • theoretical MW: 31450.5
  • GRAVY: -0.027305

Insert paragraph

⊟Function[edit | edit source]

  • ⊞TIGRFAM:
    Cellular processes Cellular processes Biosynthesis of natural products adenosyl-fluoride synthase (TIGR04507; EC 2.5.1.63; HMM-score: 92.2)
    and 1 more
    Metabolism Amino acid biosynthesis Aspartate family O-succinylhomoserine (thiol)-lyase (TIGR02080; EC 2.5.1.48; HMM-score: 12)
  • TheSEED: see SPP_0506
  • ⊞PFAM:
    no clan defined SAM_HAT_N; SAM hydroxide adenosyltransferase N-terminal domain (PF01887; HMM-score: 148.3)
    and 1 more
    SAM_HAT_C; SAM hydroxide adenosyltransferase C-terminal domain (PF20257; HMM-score: 65.4)

Insert paragraph

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Insert paragraph

⊟Localization[edit | edit source]

  • ⊞PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.012687
    • TAT(Tat/SPI): 0.001515
    • LIPO(Sec/SPII): 0.002564
  • predicted transmembrane helices (TMHMM): 0

Insert paragraph

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001063601 NCBI
  • UniProt:

Insert paragraph

⊟Protein sequence[edit | edit source]

  • MNNNLLVLQSDFGLVDGAVSAMIGVALEESPTLKIHHLTHDITPYNIFEGSYRLFQTVDYWPEGTTFVSVVDPGVGSKRKSVVAKTAKNQYIVTPDNGTLSFIKKHVGIVAIREISEVANRRQNTEHSYTFHGRDVYAYTGAKLASGHITFEEVGPELSVEQIVELPVVATIIEDHLVKGAIDILDVRFGSLWTSITREEFYKLEPEFGDRFEVTIYHADMLVYQNQVVYGKSFADVRIGQPILYINSLYRLGLAINQGSFAKAYNVGVGSSWTIEIKKIEG

Insert paragraph

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

Insert paragraph

⊟Expression & Regulation[edit | edit source]

Insert paragraph

⊟Operon[edit | edit source]

Insert paragraph

⊟Regulation[edit | edit source]

Insert paragraph

⊟Expression data[edit | edit source]

Insert paragraph

⊞Biological Material[edit | edit source]

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

⊞Other Information[edit | edit source]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

Insert paragraph

⊟Relevant publications[edit | edit source]

Insert paragraph