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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 19-NOV-2015
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae A66
- locus tag: A66_00648 [new locus tag: A66_RS03230 ]
- pan locus tag?: PNEUPAN001661000
- symbol: A66_00648
- pan gene symbol?: lctO
- synonym:
- product: Lactate 2-monooxygenase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: A66_00648 [new locus tag: A66_RS03230 ]
- symbol: A66_00648
- product: Lactate 2-monooxygenase
- replicon: chromosome
- strand: +
- coordinates: 626900..627679
- length: 780
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: LN847353 (626900..627679) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0621 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGGCACCTGTTGCGGCTCATAAATTGGCAAATGAACAGGGGGAAGTGGCGACTGCGCGT
GGTGTGCATGAGTTTGGTTCTCTTTATACAACCAGTTCTTACTCTACTGTTGACCTTCCA
GAGATTTCTGAAGCCCTTCAAGGGACACCTCATTGGTTTCAATTTTACTTTAGTAAGGAT
GACGGTATCAACCGCCACATCATGGACCGTGTGAAGGCTGAAGGTTATAAAGCGATTGTC
TTGACGGCAGATGCTACTGTAGGGGGGAATCGTGAAGTGGATAAGCGTAATGGTTTTGTC
TTCCCAGTTGGCATGCCGATTGTTGAAGAATACCTGCCAGAAGGTGCTGGTAAATCAATG
GACTTTGTTTACAAATCAGCTAAACAACGCTTGTCTCCACGCGATGTAGAATTTATCGCT
GAATACTCTGGTCTTCCTGTGTATGTCAAGGGACCACAATGCCGTGAGGACGTTGAACGT
TCGCTTGCTGCAGGAGCTTCTGGTATCTGGGTAACCAACCACGGTGGTCGTCAAATCGAC
GGTGGACCAGCTGCCTTTGACTCGCTTCAAGAAGTGGCAGAAGCAGTTGATAGACGTGTG
CCGATTGTCTTTGACTCTGGTGTTCGTCGTGGTCAACACGTCTTTAAAGCCTTGGCTTCA
GGAGCAGACCTGGTAGCTATTGGTCGCCCTGTTATTTATGGCTTGGCTCTCGGTGGTAGT
GTCGGTGTGCGTCAAGTCTTTGAACACAGTTATGCAATTGTCTGGAGCTCAGACCATTGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: A66_00648 [new locus tag: A66_RS03230 ]
- symbol: A66_00648
- description: Lactate 2-monooxygenase
- length: 259
- theoretical pI: 6.09523
- theoretical MW: 28087.4
- GRAVY: -0.166795
⊟Function[edit | edit source]
- reaction: EC 1.13.12.4? ExPASyLactate 2-monooxygenase (S)-lactate + O2 = acetate + CO2 + H2O
- TIGRFAM: Energy metabolism Other L-lactate oxidase (TIGR02708; EC 1.1.3.-; HMM-score: 527.8)and 5 moreheme/flavin dehydrogenase, mycofactocin system (TIGR03966; EC 1.-.-.-; HMM-score: 116.6)Biosynthesis of cofactors, prosthetic groups, and carriers Other isopentenyl-diphosphate delta-isomerase, type 2 (TIGR02151; EC 5.3.3.2; HMM-score: 20.7)Unknown function General IMP dehydrogenase family protein (TIGR01304; HMM-score: 18.8)Purines, pyrimidines, nucleosides, and nucleotides Purine ribonucleotide biosynthesis inosine-5'-monophosphate dehydrogenase (TIGR01302; EC 1.1.1.205; HMM-score: 15.7)Amino acid biosynthesis Histidine family imidazoleglycerol phosphate synthase, cyclase subunit (TIGR00735; HMM-score: 15)
- TheSEED: data available for D39, TIGR4
- PFAM: TIM_barrel (CL0036) FMN_dh; FMN-dependent dehydrogenase (PF01070; HMM-score: 264.7)and 6 moreIMPDH; IMP dehydrogenase / GMP reductase domain (PF00478; HMM-score: 23.2)His_biosynth; Histidine biosynthesis protein (PF00977; HMM-score: 16.5)DHO_dh; Dihydroorotate dehydrogenase (PF01180; HMM-score: 14.1)Glu_synthase; Conserved region in glutamate synthase (PF01645; HMM-score: 13.8)ThiG; Thiazole biosynthesis protein ThiG (PF05690; HMM-score: 13)NMO; Nitronate monooxygenase (PF03060; HMM-score: 12.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.013149
- TAT(Tat/SPI): 0.001317
- LIPO(Sec/SPII): 0.001661
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CRI61359 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MAPVAAHKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRHIMDRVKAEGYKAIVLTADATVGGNREVDKRNGFVFPVGMPIVEEYLPEGAGKSMDFVYKSAKQRLSPRDVEFIAEYSGLPVYVKGPQCREDVERSLAAGASGIWVTNHGGRQIDGGPAAFDSLQEVAEAVDRRVPIVFDSGVRRGQHVFKALASGADLVAIGRPVIYGLALGGSVGVRQVFEHSYAIVWSSDH
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0621 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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