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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 09-DEC-2016
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SP49
- locus tag: BMJ42_00135 [new locus tag: BMJ42_RS00665 ]
- pan locus tag?: PNEUPAN000635000
- symbol: BMJ42_00135
- pan gene symbol?: —
- synonym:
- product: phosphoglycerate mutase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: BMJ42_00135 [new locus tag: BMJ42_RS00665 ]
- symbol: BMJ42_00135
- product: phosphoglycerate mutase family protein
- replicon: chromosome
- strand: +
- coordinates: 100812..101369
- length: 558
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP018136 (100812..101369) NCBI
- BioCyc: see BMJ42_RS00665
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0028 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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541ATGGCGTTCGAACTGGTGGATTTGGATCGACAGGGCACTAGAATGAAGATTATCTTTGTA
CGTCATGGGGAGCCAGATTACCGTGAGTTAGAGGAGCGTTCTTATATAGGATTTGGGATA
GATTTGGCACCCTTGTCTGAGATGGGACGGCAGCAAGTCCAGAAATTGAGCAAAACTCCT
TTACTCTCGTCAGCTGAAATAATCGTATCTTCTGCAGTCACAAGAGCTTTAGAAACGGCT
TCGTATGTGGTCTGTGCTACGGGTCTTCCTTTAAGAGTAGAGCCTTTATTACATGAATGG
CAGGTCTATAAAACAGGAATAGAAAACTTTGAAACAGCTAGAAGACTGTTTTTAGAAAAC
AAGGGGGAGTTGCTTCCTAATAGTCCTATTCAATATGAGACAGCTACGGAAATGAAGTCT
CGGTTTCTAGAATGTATGTCTAAGTATCGAGAACATCAGACTGTGGTAGTTGTTGCTCAT
CGAATGCTCATGCGCCAGTTTGTGCCAAATGAGAAGATTGATTTTTGCCAAGTGATTGAG
TGTGAGTTAGAGATATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: BMJ42_00135 [new locus tag: BMJ42_RS00665 ]
- symbol: BMJ42_00135
- description: phosphoglycerate mutase family protein
- length: 185
- theoretical pI: 5.37641
- theoretical MW: 21385.6
- GRAVY: -0.190811
⊟Function[edit | edit source]
- TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Heme, porphyrin, and cobalamin alpha-ribazole phosphatase (TIGR03162; EC 3.1.3.73; HMM-score: 42.9)and 1 moreprobable phosphomutase, MSMEG_4193 family (TIGR03848; EC 5.4.2.-; HMM-score: 20.5)
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- PFAM: His_phosphatase (CL0071) His_Phos_1; Histidine phosphatase superfamily (branch 1) (PF00300; HMM-score: 64.9)and 1 moreOB (CL0021) Ten1; Telomere capping, CST complex subunit (PF12658; HMM-score: 12.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9957
- Cytoplasmic Membrane Score: 0.0009
- Cell wall & surface Score: 0
- Extracellular Score: 0.0033
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001524
- TAT(Tat/SPI): 0.000724
- LIPO(Sec/SPII): 0.000274
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: APJ29477 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKTPLLSSAEIIVSSAVTRALETASYVVCATGLPLRVEPLLHEWQVYKTGIENFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYREHQTVVVVAHRMLMRQFVPNEKIDFCQVIECELEI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0028 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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