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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 16-MAY-2019
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae EF3030
- locus tag: EF3030_08420 [new locus tag: EF3030_RS12230 ]
- pan locus tag?: PNEUPAN003239000
- symbol: EF3030_08420
- pan gene symbol?: —
- synonym:
- product: accessory Sec-dependent serine-rich glycoprotein adhesin
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: EF3030_08420 [new locus tag: EF3030_RS12230 ]
- symbol: EF3030_08420
- product: accessory Sec-dependent serine-rich glycoprotein adhesin
- replicon: chromosome
- strand: -
- coordinates: 1617077..1623479
- length: 6403
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP035897 (1617077..1623479) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1021
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1561
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1741
1801
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1981
2041
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2221
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2401
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3181
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5641
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5941
6001
6061
6121
6181
6241
6301
6361ATCAAATCAGGGAAGCATTGGCTACGGGCCTCGACTTCTCTTTTTGGCTTGTTTAAGGTC
ATGCGTGGTGGTGTTGATACTACTCAGGTCATGACCGAAACGGTAGAAGATAAAGTAAGT
CATTCAATTACTGGGCTTGATATCCTCAAGGGGATAGTTGCTGCGGGAACTGTCATAAGT
GGAACCGTTGCAACTCAAACGAAGGTATTTACAAATGAGTCGGCAGTACTTGAAAAAACT
GTAGAGAAAACGGATGCTTTGGCAACAAATGGTACAGTAGTTCTAGGTACGATATCTACA
AGTAATTCAGCGAGTTCAACTAGTTTGTCAGCTTCAGAGTCGGCAAGTACATCTGCATCT
GAGTCAGCCTCAACCAGCGCTTCGACCTCAGCGAGTACAAGTGCATCAGAATCAGCAAGT
ACATCGGCTTCGACAAGTATTTCTGCATCATCTACTGTAGTAGGTTCACAAACAGCTGCC
GCTACAGAAGCAACTGCTAAGAAGGTCGAAGAAGATCGTAAGAAACCAGCTAGTGATTAT
GTAGCATCAGTTACAAATGTCAATCTCCAATCTTATGCTAAGCGACGCAAGCGTTCAGTA
GATTCCATCGAGCAATTGCTGGCTTCTATAAATGCTGCTGTTTTTTCTGGCAATACGATT
GTAAATGGCGCCCCTGCAATTAATGCAAGTCTAAACATTGCTAAAAGTGAGACAAAAGTT
TATACAGGTGAAGGTGTAGATTCGGTATATCATGTTCCAATTTACTATGAATTGACAGTG
AAAAATGATGGTTCAGAATTGACCTTTACCTATACGGTTACGTATGTGAATCCTACAACA
AAGGCTCTTGGTAGTATATCAAGGATGAGTAATGGATATTCTATCTATAATTCAGGTACT
TCAATACAAACAATGTTAACCCTTGGCAGTGGTCTTGGTACCCCTTCAGGTGTAAAGAAC
TCCATTACTGACAAAAATGGTGTACAGGTTAAATACTATAATATATCTACAATGACGACG
CAGGGTAGTGGGTATACTTGGGCAAATGGTGCCCAAATGAATGGTTGGTATGCTAAGCAA
GGATATGGATTAACATCATCTTGGACTGTATCAATTACTGGAACGGATACATCCTTTACA
TTTACCCCTTACGCTGCTAAAACAGATAACATTAGAACTAACTACTTCAATGGTAGAGGA
AAGGTAGTTGAATCTAGCACGACCAGTCAGTCACTTTCACAGTCTAAGTCACTCTCAGTA
AGTGCTAGTCAAAGCGCCTCAGCCTCAGCAAGCACCTCAGCTTCTGAATCGGCCTCAACC
AGCGCATCAGCCTCAGCAAGTACAAGTGCCTCAGCCTCAGCATCAACGAGTGCGTCAGCT
TCCGCATCAACGAGTGCGTCAGCTTCAGCAAGTACCTCAGCGTCTGAATCTGCATCAACG
AGTGCATCAGCTTCCGCATCAACGAGTGCGTCAGCTTCCGCATCAACGAGTGCGTCGGCT
TCAGCAAGCACTAGCGCCTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCAGCGTCAACC
AGTGCATCAGCCTCAGCAAGTACCAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCGGCT
TCAGCGTCAACCAGCGCCTCAGCCTCAGCAAGTACCAGTGCCTCGGCTTCAGCAAGCACC
AGTGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTCAGCATCAACGAGTGCTTCAGCT
TCAGCATCAACGAGTGCTTCAGCTTCAGCAAGCACATCAGCTTCTGAGTCAGCGTCAACC
AGTGCGTCAGCTTCCGCATCAACAAGTGCCTCAGCTTCAGCAAGTACCAGTGCTTCAGCC
TCAGCAAGCACCAGTGCTTCGGCTTCAGCAAGTACAAGTGCCTCAGCCTCAGCATCAACC
AGTGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTCAGCATCAACAAGTGCATCGGCT
TCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCAAGTATC
TCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTCAGCAAGTACTAGTGCATCAGCT
TCCGCATCAACGAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTCAGCAAGCACC
AGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCCGCATCAACCAGTGCCTCGGCT
TCAGCAAGCACCAGCGCCTCAGCTTCAGCATCAACAAGTGCCTCGGCTTCAGCAAGCACC
AGTGCTTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCATCAACCAGTGCCTCAGCC
TCAGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTCAGCAAGTACT
AGTGCATCAGCTTCCGCATCAACGAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTC
TCAGCAAGCACCAGTGCGTCGGCTTCAGCATCAACCAGTGCCTCAGCCTCAGCAAGTACC
AGTGCATCAGCTTCAGCATCAACGAGTGCGTCGGCTTCCGCAAGCACCAGCGCCTCAGCC
TCAGCAAGCACCAGTGCCTCAGCTTCAGCAAGCACCAGCGCCAGCCTCAGCAAGTACCTC
AGCGTCTGAATCGGCCTCAACCAGTGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTC
AGCATCAACGAGTGCGTCAGCCTCAGCATCAACGAGTGCCTCGGCTTCCGCAAGTACTAG
TGCCTCTGAATCCGCATCAACAAGTGCATCAGCTTCAGCAAGCACCAGTGCTTCGGCTTC
AGCAAGTACTAGTGCATCAGCTTCCGCATCAACGAGTGCGTCGGCTTCAGCGTCAACCAG
CGCCTCAGCCTCAGCAAGTACAAGTGCATCAGAGTCAGCAAGTACCAGTGCTTCAGCTTC
AGCGTCAACCAGTGCCTCAGCCTCAGCCTCAACGAGTGCGTCAGCATCAGCGTCAACCAG
TGCTTCAGCATCAGCGTCAACCAGTGCATCAGTCTCAGCAAGCACCAGTGCGTCGGCTTC
AGCATCAACCAGTGCATCAGCCTCAGCAAGTACCAGTGCATCAGCTTCAGCATCAACGAG
TGCGTCGGCTTCCGCAAGTACCAGTGCATCGGCTTCAGCAAGCACCAGCGCCTCAGCTTC
AGCAAGCACCAGCGCCTCAGCCTCAGCAAGTACCTCAGCGTCTGAATCGGCCTCAACCAG
TGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTGCGTCAGCCTC
AGCATCAACGAGTGCCTCGGCTTCCGCAAGTACTAGTGCTTCAGCTTCAGCAAGCACATC
AGCTTCTGAGTCAGCGTCAACCAGTGCGTCAGCTTCCGCATCAACAAGTGCCTCAGCTTC
AGCAAGCACCAGCGCCTCAGCTTCAGCAAGTACTAGTGCATCAGCTTCCGCATCAACGAG
TGCGTCGGCTTCAGCGTCAACCAGCGCCTCAGCCTCAGCAAGTACCAGTGCCTCGGCTTC
AGCAAGCACCAGTGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTCAGCAAGTACCAG
CGCGTCAGCCTCAGCATCAACCAGTGCCTCAGCCTCAGCAAGCACCTCAGCGTCTGAATC
TGCATCAACAAGCGCGTCAGCTTCAGCGTCAACCAGTGCTTCAGCCTCAGCAAGTACAAG
TGCCTCAGCCTCAGCATCAACCAGTGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTC
AGCATCAACAAGTGCATCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAG
CGCCTCAGCCTCAGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCATCAGCCTC
AGCAAGTACAAGTGCCTCAGCCTCAGCATCAACGAGTGCGTCAGCTTCCGCATCAACAAG
TGCCTCAGCTTCAGCAAGTACCTCAGCGTCTGAATCTGCATCAACGAGTGCATCAGCTTC
CGCATCAACGAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCGGCTTCAGCAAGCACTAG
CGCCTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCAGCGTCAACCAGTGCATCAGCCTC
AGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCAAGTATCTC
AGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTCAGCAAGTACTAGTGCATCAGCTTC
CGCATCAACCAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTCAGCAAGCACCAG
TGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCCGCATCAACCAGTGCCTCGGCTTC
AGCAAGCACCAGCGCCTCAGCTTCAGCATCAACAAGTGCCTCGGCTTCAGCAAGCACCAG
TGCTTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCATCAACCAGTGCATCAGCCTC
AGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTCAGCAAGTACTAG
TGCATCAGCTTCCGCATCAACGAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTC
AGCAAGCACCAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTCAGCAAGCACCAG
TGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCCGCATCAACCAGTGCCTCGGCTTC
AGCAAGCACCAGCGCCTCAGCTTCAGCATCAACAAGTGCCTCGGCTTCAGCAAGCACCAG
TGCTTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCATCAACCAGTGCATCAGCCTC
AGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTCAGCAAGTACTAG
TGCATCAGCTTCCGCATCAACGAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTC
AGCAAGCACCAGTGCGTCGGCTTCAGCATCAACCAGTGCCTCAGCCTCAGCAAGCACCTC
AGCGTCTGAATCTGCATCAACAAGCGCGTCAGCTTCAGCGTCAACCAGTGCTTCAGCCTC
AGCAAGCACAAGCGCCTCAACTTCAGCATCAACCAGTGCGTCAGCTTCAGCAAGCACCTC
AGCGTCTGAATCGGCATCAACGAGTGCTTCGGCCTCAGCAAGCACAAGCGCCTCAGCCTC
AGCAAGCACCAGTGCTTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCATCAACCAG
TGCATCAGCCTCAGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTC
AGCAAGTACTAGTGCATCAGCTTCCGCATCAACGAGTGCATCGGCTTCAGCGTCAACCAG
TGCATCAGTCTCAGCAAGCACCAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGTCTC
AGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCCGCATCAACCAG
TGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTCAGCATCAACAAGTGCCTCGGCTTC
AGCAAGCACCAGTGCTTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCATCAACCAG
TGCATCAGCCTCAGCAAGTATCTCAGCGTCTGAATCGGCATCAACGAGTGCGTCAGCCTC
AGCAAGCACAAGCGCCTCAACTTCAGCATCAACCAGTGCGTCAGCTTCAGCAAGCACCTC
AGCGTCTGAATCGGCATCAACGAGTGCTTCGGCCTCAGCAAGCACAAGCGCCTCAGCCTC
AGCAAGTACCAGTGCTTCAGCTTCAGCATCAACAAGTGCATCAGCTTCAGCAAGCACCAG
TGCTTCGGCTTCAGCAAGTACTAGTGCATCAGCTTCAGCATCAACGAGTGCGTCGGCTTC
AGCGTCAACCAGCGCCTCAGCCTCAGCAAGTACCAGTGCCTCGGCTTCAGCAAGCACCAG
TGCCTCGGCTTCAGCAAGCACATCAGCTTCTGAGTCAGCGTCAACCAGTGCATCAGCTTC
AGCATCAACGAGTGCGTCGGCTTCCGCAAGTACCAGTGCATCGGCTTCAGCAAGCACCAG
CGCCTCAGCTTCAGCAAGTACCAGCGCGTCAGCCTCAGCATCAACCAGTGCCTCAGCCTC
AGCAAGCACCTCAGCGTCTGAATCTGCATCAACAAGCGCGTCAGCTTCAGCGTCAACCAG
TGCTTCAGCCTCAGCAAGCACAAGCGCCTCAACTTCAGCATCAACCAGTGCGTCAGCCTC
AGCAAGCACCAGTGCTTCGGCTTCAGCAAGTACAAGTGCCTCAGCCTCAGCATCAACCAG
TGCCTCGGCTTCAGCAAGCACCAGCGCCTCAGCTTCAGCATCA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: EF3030_08420 [new locus tag: EF3030_RS12230 ]
- symbol: EF3030_08420
- description: accessory Sec-dependent serine-rich glycoprotein adhesin
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]