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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 14-FEB-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ASP0581
- locus tag: EL334_RS12580 [old locus tag: ASP0581_05620 ]
- pan locus tag?: PNEUPAN001492000
- symbol: EL334_RS12580
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: EL334_RS12580 [old locus tag: ASP0581_05620 ]
- symbol: EL334_RS12580
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 557386..557751
- length: 366
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_AP019192 (557386..557751) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361TTGAATAATGTTGATAATCAACCTGCTACTGAAGTTCCTAGTTCAGGAATTACTGTAAAA
TTAAATGCTAAAGATAATGCTGGAAACTGGACAAGTGCTTCGAATAAAAAAGAAGTAACA
GTAAAAATTGTTTCTGCTAAACCGACATATCCAGACAAAATTTTAGTGAAAAATCCTAAT
AATATAAAAGATACAGAAAAAAATGCCATTATTGAAAAATTGAAAGAGGCAATTAAAAAT
CATCCAGCAGGAGCTCCAACCTTTGCTAAAGGTGAAGGAGAGCATGCAAATGATATTGTA
GCAACTTATTCAGATGGTACAACTTATTATGTACCGTTAAATGATGTGACAAAATATGCG
AGGTAG60
120
180
240
300
360
366
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: EL334_RS12580 [old locus tag: ASP0581_05620 ]
- symbol: EL334_RS12580
- description: hypothetical protein
- length: 121
- theoretical pI: 9.30918
- theoretical MW: 13113.6
- GRAVY: -0.7
⊟Function[edit | edit source]
- TIGRFAM: hyperosmolarity resistance protein Ebh (TIGR04264; HMM-score: 28.4)and 1 morealanine--tRNA ligase (TIGR03683; EC 6.1.1.7; HMM-score: 11.2)
- TheSEED: data available for Hungary19A-6, TIGR4
- PFAM: E-set (CL0159) aRib; Atypical Rib domain (PF18938; HMM-score: 30.5)and 3 moreUBC (CL0208) RWD; RWD domain (PF05773; HMM-score: 13.8)6PGD_C (CL0106) PDH_C; Prephenate dehydrogenase, dimerization domain (PF20463; HMM-score: 12.6)no clan defined DUF6800; Family of unknown function (DUF6800) (PF20607; HMM-score: 11.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0.24
- Cytoplasmic Membrane Score: 0.05
- Cellwall Score: 0.8
- Extracellular Score: 8.91
- Internal Helices: 0
- DeepLocPro: Cell wall & surface
- Cytoplasmic Score: 0.0087
- Cytoplasmic Membrane Score: 0.0019
- Cell wall & surface Score: 0.7822
- Extracellular Score: 0.2072
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.047879
- TAT(Tat/SPI): 0.004411
- LIPO(Sec/SPII): 0.011817
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_078376618 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MNNVDNQPATEVPSSGITVKLNAKDNAGNWTSASNKKEVTVKIVSAKPTYPDKILVKNPNNIKDTEKNAIIEKLKEAIKNHPAGAPTFAKGEGEHANDIVATYSDGTTYYVPLNDVTKYAR
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]