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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 24-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae 6A-10
  • locus tag: HKM25_RS07810 [old locus tag: HKM25_1595 ]
  • pan locus tag?: PNEUPAN002951000
  • symbol: HKM25_RS07810
  • pan gene symbol?: —
  • synonym:
  • product: AAA family ATPase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: HKM25_RS07810 [old locus tag: HKM25_1595 ]
  • symbol: HKM25_RS07810
  • product: AAA family ATPase
  • replicon: chromosome
  • strand: -
  • coordinates: 1535947..1536774
  • length: 828
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP053210 (1535947..1536774) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCATTTACACTTCCAGCAAATAAACCACAAGTTCCTAAAGATACCCCACGAAATTTT
    TTCATCTACGGTGAAACCATGAGCGGAAAGTCTTATCTTGCAAATGAATTCCCAAATCCA
    ATCGTTTTGAACACAGACGGGAATGCAGAAGCTAACACTGTTCCAAGCATTCAGCTGATC
    AATGAAAAAGATGACAAGGGACGAATTACCAATTCAGTAATTAAGCAGCTTGGAGATATC
    TTGCTTGCTCTCCAGACACAGAAGCACTCTTATGAAACAGTCGTTATTGATGTAATTGAC
    GATGTTATTGAAATGATTAAGATTGCAGTTTGTGATGAATTAACCCCAGTTGGTAAACCT
    CGCTTGAAATCCTTGTCGGAAATTCCATACGGCAAAGGATACGACTTCTTTAACCAAGCT
    ATCACAGAATTAGTCATTGACCTCAAAGCATTGCCAATGAATGTTATTTACATCAGCCGT
    CAGGTATCTGAATATGATGACAATGGCAATGCCACCAAAGACAAGCCAAGCTTGAAAGAT
    AAGTATGTCAATCTTATCAATGGAAACTCTGATTTGATGATCCACACTGAAAAACTCGGC
    AACAACTACAACCGTGAGGTTGACCGCAAGCGTAAGACCTATTATGCGGACCAGGTTGAT
    GACAAGGCCATCTTGAAAATCTTGGCAACTATCCGTGGGGCTGTTGAGCCTGCAAAGGGC
    AAGCTAGCCCCTAAAAAAGAAGCAGCTAAGACAACTAAACCAGCTAAGACCGAAAAAACA
    AAAGAGGCACCTAAGAAAGAAGTTGACTCTGATGATGAACTATTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    828

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: HKM25_RS07810 [old locus tag: HKM25_1595 ]
  • symbol: HKM25_RS07810
  • description: AAA family ATPase
  • length: 275
  • theoretical pI: 6.57309
  • theoretical MW: 30736.9
  • GRAVY: -0.533455

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Mobile and extrachromosomal element functions Prophage functions phage nucleotide-binding protein (TIGR01618; HMM-score: 25)
  • TheSEED:
  • PFAM:
    P-loop_NTPase (CL0023) AAA_24; AAA domain (PF13479; HMM-score: 87.7)
    and 3 more
    TniB; Bacterial TniB protein (PF05621; HMM-score: 22.3)
    no clan defined Ribosomal_60s; 60s Acidic ribosomal protein (PF00428; HMM-score: 17.7)
    P-loop_NTPase (CL0023) AAA_16; AAA ATPase domain (PF13191; HMM-score: 16.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9014
    • Cytoplasmic Membrane Score: 0.0227
    • Cell wall & surface Score: 0.0004
    • Extracellular Score: 0.0756
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.014282
    • TAT(Tat/SPI): 0.001723
    • LIPO(Sec/SPII): 0.001661
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000885997 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MAFTLPANKPQVPKDTPRNFFIYGETMSGKSYLANEFPNPIVLNTDGNAEANTVPSIQLINEKDDKGRITNSVIKQLGDILLALQTQKHSYETVVIDVIDDVIEMIKIAVCDELTPVGKPRLKSLSEIPYGKGYDFFNQAITELVIDLKALPMNVIYISRQVSEYDDNGNATKDKPSLKDKYVNLINGNSDLMIHTEKLGNNYNREVDRKRKTYYADQVDDKAILKILATIRGAVEPAKGKLAPKKEAAKTTKPAKTEKTKEAPKKEVDSDDELF

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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