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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 02-OCT-2023
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae BVJ1JL
- locus tag: JN057_01105 [new locus tag: JN057_RS05380 ]
- pan locus tag?: PNEUPAN002119000
- symbol: JN057_01105
- pan gene symbol?: mobC
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: JN057_01105 [new locus tag: JN057_RS05380 ]
- symbol: JN057_01105
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1035574..1035801
- length: 228
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP071871 (1035574..1035801) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGTCATTTGTCACGATTAACACTGATACTTATGAACAGTTAGTGTTTGAATTGAGGAGG
ATTGGAAATAACATCAATCAAATTGCGCGTGCGATTAATCAAAGCCATCTGATTTCTCAG
GACCAATTACAAGAATTGAGTAAAGGAGTCGGAGAGTTAATTAAGGAAGTGGACAAAGAA
TTTCAAGTGGAGGTGAAAAGACTGAAGGAGTTTCATGGTAGTTACTAA60
120
180
228
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: JN057_01105 [new locus tag: JN057_RS05380 ]
- symbol: JN057_01105
- description: hypothetical protein
- length: 75
- theoretical pI: 5.67822
- theoretical MW: 8737.82
- GRAVY: -0.462667
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Anions phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 14.5)Regulatory functions Other phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 14.5)rhombotail lipoprotein (TIGR04179; HMM-score: 13)
- TheSEED: data available for D39, TIGR4
- PFAM: Met_repress (CL0057) MobC; Bacterial mobilisation protein (MobC) (PF05713; HMM-score: 59.5)and 8 moreMobC_2; MobC-like protein (PF19514; HMM-score: 15.9)no clan defined Muted; Organelle biogenesis, Muted-like protein (PF14942; HMM-score: 15.7)Baculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus (PF04513; HMM-score: 15.1)DegS; Sensor protein DegS (PF05384; HMM-score: 13.9)Lipoprotein_7; Adhesin lipoprotein (PF01540; HMM-score: 13.8)Adeno_terminal; Adenoviral DNA terminal protein (PF02459; HMM-score: 12.8)Phage_min_cap2; Phage minor capsid protein 2 (PF06152; HMM-score: 12.3)SF3a60_bindingd; Splicing factor SF3a60 binding domain (PF12108; HMM-score: 12.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.002406
- TAT(Tat/SPI): 0.000154
- LIPO(Sec/SPII): 0.000448
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: QTE32712 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MSFVTINTDTYEQLVFELRRIGNNINQIARAINQSHLISQDQLQELSKGVGELIKEVDKEFQVEVKRLKEFHGSY
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.