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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 05-OCT-2017
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae MDRSPN001
- locus tag: MDRSPN_01336 [new locus tag: MDRSPN_RS07020 ]
- pan locus tag?: PNEUPAN003010000
- symbol: MDRSPN_01336
- pan gene symbol?: mngA
- synonym:
- product: PTS fructose transporter subunit IIA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: MDRSPN_01336 [new locus tag: MDRSPN_RS07020 ]
- symbol: MDRSPN_01336
- product: PTS fructose transporter subunit IIA
- replicon: chromosome
- strand: -
- coordinates: 1354423..1354872
- length: 450
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: AP018391 (1354423..1354872) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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421ATGGAAATCAAAGATATTCTTAATGTGAGTCTGATCCAGACGGATTTACAGATGCAGAGC
AAAGAAGAGGTTTTTGAGGCATTAGCTCAACTATTGGTTGAGACGGGTTATGTGTCTGAT
AGAGACCAATTTATCGAAGGTCTTTATCAGAGAGAGGCAGAAGGACAGACCGGTATTGGG
AATTATATTGCTATTCCCCATAGCAAGAGTTCTGCTGTGGAGAAGGCGGGGGTAGTCATA
GCTATAAATCACAATGAGATTCCTTGGGAGACCATTGATGGGAAAGGGGTCAAAGTAATT
GTACTCTTTGCAGTTGGTGATGATACAGAAGCTGCTAGGGAGCATTTGAAGACCTTATCA
CTCTTTGCTCGAAAACTTGGTAATGACGAAGTTGTTGCCAAATTAGTTCGGGCTCAGACA
TCTGATGATGTGATTGCAGCTTTTTGTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: MDRSPN_01336 [new locus tag: MDRSPN_RS07020 ]
- symbol: MDRSPN_01336
- description: PTS fructose transporter subunit IIA
- length: 149
- theoretical pI: 4.41633
- theoretical MW: 16359.5
- GRAVY: -0.0120805
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 153.1)Signal transduction PTS PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 153.1)and 1 moreSignal transduction PTS PTS IIA-like nitrogen-regulatory protein PtsN (TIGR01419; HMM-score: 76.8)
- TheSEED: data available for Hungary19A-6, TIGR4
- PFAM: PTase-anion_tr (CL0340) PTS_EIIA_2; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (PF00359; HMM-score: 130.6)and 1 moreno clan defined DUF6497; Family of unknown function (DUF6497) (PF20107; HMM-score: 12.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 1.05
- Cytoplasmic Membrane Score: 8.78
- Cellwall Score: 0.08
- Extracellular Score: 0.09
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.005877
- TAT(Tat/SPI): 0.000493
- LIPO(Sec/SPII): 0.000346
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: BBA59534 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MEIKDILNVSLIQTDLQMQSKEEVFEALAQLLVETGYVSDRDQFIEGLYQREAEGQTGIGNYIAIPHSKSSAVEKAGVVIAINHNEIPWETIDGKGVKVIVLFAVGDDTEAAREHLKTLSLFARKLGNDEVVAKLVRAQTSDDVIAAFC
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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