Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-DEC-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae MDRSPN001
- locus tag: MDRSPN_RS05850 [old locus tag: MDRSPN_01109 ]
- pan locus tag?: PNEUPAN001843000
- symbol: MDRSPN_RS05850
- pan gene symbol?: —
- synonym:
- product: esterase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: MDRSPN_RS05850 [old locus tag: MDRSPN_01109 ]
- symbol: MDRSPN_RS05850
- product: esterase family protein
- replicon: chromosome
- strand: -
- coordinates: 1130996..1131736
- length: 741
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_AP018391 (1130996..1131736) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_2238 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721ATGCATATTGAAAACCTTAGCCACTGGAGTGGCAATCTTAACCGTGAAATGTATCTTAAT
CGTTATGGACATGCTGGGATTCCAGTTGTGGTCTTTGCTTCATCAGGTGGTAGTCACAAT
GAATACTATGATTTTGGCATGATTGATGCTTGTGCTTCCTTTATCGAGGAAGGCCGTGTC
CAGTTTTTTACCCTATCCAGTGTAGACAGTGAGAGCTGGTTGGCCACTTGGAAAAATGGT
CACGACCAAGCAGAGATGCACCGTGCCTACGAGCGCTATGTGATTGATGAGGCCATTCCT
TTTATCAAGCATAAGACAGGTTGGTTTGATGGTATGATGACGACAGGTTGCTCGATGGGC
GCCTACCATGCAGTCAACTTTTTTCTCCAACATCCAGATGTCTTTACCAAGGTGATTGCT
CTTAGTGGTGTTTACGACGCACGTTTCTTTGTTGGCGATTACTACAATGACGATGCTATT
TATCAAAACTCGCCAGTAGATTATATCTGGAATCAGAATGACGGCTGGTTTATTGACCGT
TACCGTCAGGCAGAGATTGTGCTGTGTACGGGTCTTGGAGCCTGGGAACAAGACGGTCTA
CCATCTTTCTACAAGCTTAAAGAAGCCTTTGACCAGAAACAAATTCCAGCCTGGTTTGCT
GAATGGGGACACGATGTCGCCCACGACTGGGAATGGTGGCGCAAACAAATGCCTTATTTC
CTCGGCAATCTCTATTTATAA60
120
180
240
300
360
420
480
540
600
660
720
741
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: MDRSPN_RS05850 [old locus tag: MDRSPN_01109 ]
- symbol: MDRSPN_RS05850
- description: esterase family protein
- length: 246
- theoretical pI: 4.82035
- theoretical MW: 28734.9
- GRAVY: -0.356911
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: AB_hydrolase (CL0028) Esterase; Putative esterase (PF00756; HMM-score: 54)and 2 morePeptidase_S9; Prolyl oligopeptidase family (PF00326; HMM-score: 19.4)Hydrolase_4; Serine aminopeptidase, S33 (PF12146; HMM-score: 12)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.7136
- Cytoplasmic Membrane Score: 0.0023
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.284
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.027667
- TAT(Tat/SPI): 0.005373
- LIPO(Sec/SPII): 0.013352
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_033687156 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MHIENLSHWSGNLNREMYLNRYGHAGIPVVVFASSGGSHNEYYDFGMIDACASFIEEGRVQFFTLSSVDSESWLATWKNGHDQAEMHRAYERYVIDEAIPFIKHKTGWFDGMMTTGCSMGAYHAVNFFLQHPDVFTKVIALSGVYDARFFVGDYYNDDAIYQNSPVDYIWNQNDGWFIDRYRQAEIVLCTGLGAWEQDGLPSFYKLKEAFDQKQIPAWFAEWGHDVAHDWEWWRKQMPYFLGNLYL
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2238 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]