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serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
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serotype 6A
70585
serotype 5
A026
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serotype 3
AP200
serotype 11A
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ATCC 700669
serotype 23F
BM6001
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CGSP14
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G54
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HU-OH
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Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
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SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 03-AUG-2015

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae ST556
  • locus tag: MYY_0665 [new locus tag: MYY_RS03415 ]
  • pan locus tag?: PNEUPAN001510000
  • symbol: MYY_0665
  • pan gene symbol?: murN
  • synonym:
  • product: peptidoglycan branched peptide synthesis protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: MYY_0665 [new locus tag: MYY_RS03415 ]
  • symbol: MYY_0665
  • product: peptidoglycan branched peptide synthesis protein
  • replicon: chromosome
  • strand: +
  • coordinates: 643109..644341
  • length: 1233
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCACTAACAACACTCACGAAAGAAGAGTTTCAGACTTATTCTGATCAGGTTTCTTCT
    CGTTCCTTTATGCAATCTGTCCAGATGGGGGATTTGCTAGAAAAAAGAGGGGCTCGAATT
    GTTTATCTTGCTTTGAAACAAGAAGGAGAAATTCAAGTTGCAGCTCTGGTTTATAGCTTG
    CCCATGCTGGGTGGTCTGCATATGGAACTCAATTCGGGGCCGATTTATACCCAACAAGAT
    GCTCTTCCAGTTTTTTATGCAGAGTTAAAAGAATATGCCAAGCAAAATGGTGTATTAGAG
    TTGCTTGTAAAACCTTATGAAACTTATCAAACTTTTGATAGCCAAGGTAATCCAATAGAT
    GCTGAGAAAAAAAGTATTATTCAAGGTTTGACTGATTTAGGTTATCAATTTGATGGCTTA
    ATAACAGGTTACCCAGGTGGAGAACCAGATTGGTTATACTATAAAGATTTAACTGAATTA
    ACTGAAAAGAGTTTGCTTAAAAGTTTTAGCAAAAAGGGTAAACCCTTGGTGAAAAAGGCT
    GAAACCTTTGGCATTCGGTTGAAAAAGTTAAAACGTGAAGAACTATCGATTTTTAAGAAT
    ATAACAAAAGAAACCTCTGAACGTAGAGAATATAGTGATAAAAGTTTAGAATATTATGAG
    CATTTTTATGATACTTTTGGAGAACAAGCGGAGTTTCTCATAGCAAGCTTGAATTTTTCG
    GACTATATGAGCAAATTGCAAGGTGAACAAAGTAAACTAGAAGAAAACTTGGACAAGTTG
    CGACTTGATTTGAGTAAAAATCCTCATTCTGAGAAAAAACAAAATCAACTGAGAGAATAT
    TCTAGTCAATTTGAAACGTTTGAAGTTCGAAAAGCAGAAGCGCGAGACTTGATTGAAAAA
    TATGGAGAAGAAGATATTGTTTTAGCTGGGAGTTTATTTGTTTATATGCCTCAGGAAACG
    ACTTATCTCTTTAGTGGTTCCTACACTGAGTTTAATAAGTTCTATGCCCCTGCCCTGCTT
    CAAAAATATGTTATGTTGGAAAGCATAAAACGTGGAATACCTAAATACAACTTCCTAGGC
    ATTCAAGGGATTTTTGATGGAAGTGATGGTGTTTTGCGTTTTAAACAGAATTTTAATGGC
    TATATTGTACGCAAAGCAGGTACTTTCCGTTACCATCCATCGCCTTTAAAATACAAAGCT
    ATCCAGTTACTCAAAAAAATAGTAGGACGTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1233

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: MYY_0665 [new locus tag: MYY_RS03415 ]
  • symbol: MYY_0665
  • description: peptidoglycan branched peptide synthesis protein
  • length: 410
  • theoretical pI: 7.69544
  • theoretical MW: 47310.6
  • GRAVY: -0.514878

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • tRNA-dependent lipid II-Ala--L-alanine ligase
    Cell Wall and Capsule Cell Wall and Capsule - no subcategory tRNA-dependent amino acid transfers  tRNA-dependent lipid II-Ala--L-alanine ligase
  • PFAM:
    Acetyltrans (CL0257) FemAB; FemAB family (PF02388; HMM-score: 476.3)
    and 2 more
    Acetyltransf_6; Acetyltransferase (GNAT) domain (PF13480; HMM-score: 13.5)
    no clan defined DUF3340; C-terminal domain of tail specific protease (DUF3340) (PF11818; HMM-score: 12.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.67
    • Cytoplasmic Membrane Score: 0.01
    • Cellwall Score: 0.15
    • Extracellular Score: 0.17
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9011
    • Cytoplasmic Membrane Score: 0.0721
    • Cell wall & surface Score: 0.0146
    • Extracellular Score: 0.0122
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002132
    • TAT(Tat/SPI): 0.000687
    • LIPO(Sec/SPII): 0.000264
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: AFC94326 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MALTTLTKEEFQTYSDQVSSRSFMQSVQMGDLLEKRGARIVYLALKQEGEIQVAALVYSLPMLGGLHMELNSGPIYTQQDALPVFYAELKEYAKQNGVLELLVKPYETYQTFDSQGNPIDAEKKSIIQGLTDLGYQFDGLITGYPGGEPDWLYYKDLTELTEKSLLKSFSKKGKPLVKKAETFGIRLKKLKREELSIFKNITKETSERREYSDKSLEYYEHFYDTFGEQAEFLIASLNFSDYMSKLQGEQSKLEENLDKLRLDLSKNPHSEKKQNQLREYSSQFETFEVRKAEARDLIEKYGEEDIVLAGSLFVYMPQETTYLFSGSYTEFNKFYAPALLQKYVMLESIKRGIPKYNFLGIQGIFDGSDGVLRFKQNFNGYIVRKAGTFRYHPSPLKYKAIQLLKKIVGR

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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