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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 04-SEP-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae BM6001
- locus tag: ODS73_04435 [new locus tag: ODS73_RS04440 ]
- pan locus tag?: PNEUPAN001806000
- symbol: ODS73_04435
- pan gene symbol?: sarA_2
- synonym:
- product: peptide ABC transporter substrate-binding protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: ODS73_04435 [new locus tag: ODS73_RS04440 ]
- symbol: ODS73_04435
- product: peptide ABC transporter substrate-binding protein
- replicon: chromosome
- strand: +
- coordinates: 850159..850863
- length: 705
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP107038 (850159..850863) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0750 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661GTGGTCCTGAGCACGTTAGCTATTTTAGTGGCTTGTGGAAAAACTGATAAAGAAGCAGAT
GCACCGACAACATTTTCTTATGTCTATGCAGTAGATCCAGCATCATTGGGCTACAGTATA
GCGACTCGAACATCGAGGACAGACGTTATTGGAAATGTTATTGATGGTTTGATGGAAAAT
GATAAATACGGCAATGTTGCTCCTTCTCAAAAAGACTATGATTTGAATAGTACAGGATGG
GCTCCAAGCTATCAAGATCCAGCGTCTTACTTGAATATTATGGATCCAAAATCTGGTTCT
GCCATGAAACACCTTGGTATTACGAAAGGAAAAGATAAGGATGTTGTAGCTAAACCTGGT
TTGGATAAATATAAGAAATTGTTAGAAGATGCTGTTTCTGAGACCACTGACCTAGAGAAG
AGATATGAAAAATATGCCAAAGCTCAAGCTTGGTCGACAGATAGTTCATTATTGATGCCA
ACAGCTTCATCTGGTGGTTCTCCAATTGTAAGTAACGTAGTACCATTCTCAAAACCATAC
TCACAAGTTGGTATTAAGGGGGAACCATATATCTTTAAAGGAATGAAATTGCAAAAAGAT
ATTGTTACAACAAAAGAATATAACGAGGTTTTTAAAAAATGGCAAAAAGAAAAATTGGAA
TCCAATAGCAAATACCAAAAAGAACTAGAAAAACACATTAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: ODS73_04435 [new locus tag: ODS73_RS04440 ]
- symbol: ODS73_04435
- description: peptide ABC transporter substrate-binding protein
- length: 234
- theoretical pI: 9.00772
- theoretical MW: 25876.2
- GRAVY: -0.565812
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for D39, Hungary19A-6
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0.01
- Cytoplasmic Membrane Score: 0.53
- Cellwall Score: 8.75
- Extracellular Score: 0.7
- Internal Helices: 0
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0.8968
- Cell wall & surface Score: 0.0056
- Extracellular Score: 0.0976
- SignalP: Signal peptide LIPO(Sec/SPII) length 11 aa
- SP(Sec/SPI): 0.054568
- TAT(Tat/SPI): 0.001997
- LIPO(Sec/SPII): 0.62949
- Cleavage Site: CS pos: 11-12. LVA-CG. Pr: 0.6259
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WIA46597 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MVLSTLAILVACGKTDKEADAPTTFSYVYAVDPASLGYSIATRTSRTDVIGNVIDGLMENDKYGNVAPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPGLDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMPTASSGGSPIVSNVVPFSKPYSQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKHIK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0750 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]