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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 08-SEP-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae BM6001
  • locus tag: ODS73_RS07160 [old locus tag: ODS73_07160 ]
  • pan locus tag?: PNEUPAN002674000
  • symbol: pstA
  • pan gene symbol?: pstA2
  • synonym:
  • product: phosphate ABC transporter permease PstA

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: ODS73_RS07160 [old locus tag: ODS73_07160 ]
  • symbol: pstA
  • product: phosphate ABC transporter permease PstA
  • replicon: chromosome
  • strand: -
  • coordinates: 1397449..1398333
  • length: 885
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP107038 (1397449..1398333) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1230 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGCGCGCTAAGAAATTAGATAAACTTGCAACAGCTGTCCTCTATACGATTGCTAGCATC
    ATTGTGACAATCTTGGCTTCCTTGATTCTCTATATCTTGGTTCGGGGCTTGCCCCATATC
    TCTTGGTCTTTCTTGACTGGAAGGTCTTCTGCTTTTCAAGCAGGTGGTGGGATTGGCATT
    CAGCTTTACAATTCCTTTTTCCTATTGGTCATTACCTTGATTATTTCTGTACCTCTTTCT
    ATGGGAGCTGGGATTTACTTGGCTGAATATGCTAAAAAAGGTCCTGTTACCAACTTTGTG
    TGGACTTGTATTGAAATCTTGTCCTCTTTACCATCAGTGGTGGTGGGTCTCTTTGGTTAC
    TTGATCTTTGTAGTCCAGTTTGAGTATGGATTTTCAATCATTTCAGGTGCCTTGGCCTTG
    ACAGTCTTTAATTTGCCTCAGATGACGCGTAATGTAGAGGATAGTTTGAAACACGTTCAC
    CATACCCAACGTGAGGCTGGTCTGGCTCTTGGGATTTCTCGCTGGGAGACAGTGGTTCAT
    GTTGTTATTCCAGAAGCGCTTCCAGGTATTGTAACGGGTGTCGTCTTGGCATCTGGTCGT
    ATCTTTGGCGAAGCTGCAGCTCTGATCTATACAGCAGGGCAATCGGCGCCAGCTCTTGAC
    TGGTCTAACTGGAATATCCTCAGTGTGACTAGCCCCATCTCTATCTTCCGTCAAGCAGAA
    ACCTTGGCTGTCCATATCTGGAAAGTCAATAGTGAAGGCACTATTCCAGATGGAACCATT
    GTATCAGCAGGTTCTGCCGCTGTGCTCCTGATCTTTATCCTGATTTTTAACTTTGGAGCT
    CGTAAGTTCGGAAGCTATCTACACAAGAAATTAACCGCTGCCTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    885

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: ODS73_RS07160 [old locus tag: ODS73_07160 ]
  • symbol: PstA
  • description: phosphate ABC transporter permease PstA
  • length: 294
  • theoretical pI: 9.67085
  • theoretical MW: 31649
  • GRAVY: 0.752721

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstA (TIGR00974; HMM-score: 250.8)
    and 15 more
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstC (TIGR02138; HMM-score: 129.5)
    Metabolism Transport and binding proteins Anions molybdate ABC transporter, permease protein (TIGR02141; HMM-score: 51.5)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein CysT (TIGR02139; HMM-score: 49.1)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein (TIGR00969; HMM-score: 41.7)
    NifC-like ABC-type porter (TIGR01581; HMM-score: 39.3)
    Metabolism Transport and binding proteins Anions phosphonate ABC transporter, permease protein PhnE (TIGR01097; HMM-score: 37.9)
    choline ABC transporter, permease protein (TIGR03416; HMM-score: 36.2)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein CysW (TIGR02140; HMM-score: 35.4)
    2-aminoethylphosphonate ABC transporter, permease protein (TIGR03226; HMM-score: 29.8)
    ectoine/hydroxyectoine ABC transporter, permease protein EhuD (TIGR03003; HMM-score: 26.8)
    2-aminoethylphosphonate ABC transport system, membrane component PhnV (TIGR03255; HMM-score: 24.7)
    ectoine/hydroxyectoine ABC transporter, permease protein EhuC (TIGR03004; HMM-score: 17.3)
    Cellular processes Cellular processes Conjugation P-type conjugative transfer protein TrbL (TIGR02783; HMM-score: 15)
    bacterial surface protein 26-residue repeat (TIGR02167; HMM-score: 11.1)
    Metabolism Transport and binding proteins Amino acids, peptides and amines amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family (TIGR01726; HMM-score: 6)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • PFAM:
    BPD_transp_1 (CL0404) BPD_transp_1; Binding-protein-dependent transport system inner membrane component (PF00528; HMM-score: 113.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 1
    • Cell wall & surface Score: 0
    • Extracellular Score: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.010264
    • TAT(Tat/SPI): 0.000377
    • LIPO(Sec/SPII): 0.004205
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_284060506 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MRAKKLDKLATAVLYTIASIIVTILASLILYILVRGLPHISWSFLTGRSSAFQAGGGIGIQLYNSFFLLVITLIISVPLSMGAGIYLAEYAKKGPVTNFVWTCIEILSSLPSVVVGLFGYLIFVVQFEYGFSIISGALALTVFNLPQMTRNVEDSLKHVHHTQREAGLALGISRWETVVHVVIPEALPGIVTGVVLASGRIFGEAAALIYTAGQSAPALDWSNWNILSVTSPISIFRQAETLAVHIWKVNSEGTIPDGTIVSAGSAAVLLIFILIFNFGARKFGSYLHKKLTAA

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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