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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 08-SEP-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae BM6001
  • locus tag: ODS73_RS09170 [old locus tag: ODS73_09160 ]
  • pan locus tag?: PNEUPAN003184000
  • symbol: ODS73_RS09170
  • pan gene symbol?: —
  • synonym:
  • product: aromatic acid exporter family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: ODS73_RS09170 [old locus tag: ODS73_09160 ]
  • symbol: ODS73_RS09170
  • product: aromatic acid exporter family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1776266..1777219
  • length: 954
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP107038 (1776266..1777219) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1564 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTCTATTAGCCAACGTACGACCAAGCTCATCTTAGCTACCTGTCTTGCCTACCTGCTT
    GCTTATTTTCTCAATCTTTCATCAGCAGTTTCGGCTGGAATTATCGCTCTCTTGAGCCTA
    TCTGATACGCGTAGAAGTACTTTAAAACTGGCTCGCAATCGTCTTTTTTCTATGCTTCTA
    GCTCTGGCTATCGGTGTTCTAGCTTTTCACTTGAGCGGATTTCATATCTGGAGTCTCGGC
    CTCTATCTGGCCTTCTACGTTCCTTTAGCCTACAAGATGGGCTGGGAAATTGGCATCACA
    CCAAGCACTGTTTTGGTTAGCCATCTCTTGGTTCAAGAGTCAACCTCTCCAGACCTTCTA
    GTCAATGAATTCCTTCTCTTTGCTATTGGTACAGGATTTGCCTTGCTTGTTAATCTCTAT
    ATGCCTTCACGAGAAGAGGAAATCCAGCACTACCACACGCTGGTGGAAGAAAAGTTAAAA
    GATATCCTCCAGCGCTTCAAATACTATTTATCCAGAGGAGACGGACGCAACCGAGCACAG
    CTGGTAGCAGAATTAGACACGCTTTTGAAAGAAGCCCTCAGACTGGTCTATTTGGACCAC
    TCTGACCACCTCTTTCACCAGACCGACTACCATATCCACTACTTTGAGATGAGACAGCGA
    CAAAGTCGTATCCTGAGAAACATGGCCCAACAGATTAACACTTGTCACCTTGCCGCCAGT
    GAAAGCCTGATCTTAGCGCAACTCTTTTCAAAAATTGCAGGTCAACTGAGCCAGACCAAT
    CCTGCTTCTGATTTGCTAGATGAAATTGAACGTTATCTGGAAGTCTTCCGGAACCGCAGT
    CTGCCCAAGACAAGAGAAGAATTTGAAACCCGCGCCACCCTTCTTCAACTCCTACGTGAA
    GCCAAAACCTTCATCCAAGTAAAAGTTGATTTTTACCAAAAATATAGACAGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    954

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: ODS73_RS09170 [old locus tag: ODS73_09160 ]
  • symbol: ODS73_RS09170
  • description: aromatic acid exporter family protein
  • length: 317
  • theoretical pI: 9.1134
  • theoretical MW: 36565.2
  • GRAVY: 0.0678233

⊟Function[edit | edit source]

  • TIGRFAM:
    uncharacterized hydrophobic domain (TIGR00271; HMM-score: 9.4)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • PFAM:
    no clan defined ArAE_1_C; Putative aromatic acid exporter C-terminal domain (PF11728; HMM-score: 151.3)
    FUSC (CL0307) ArAE_1; Aromatic acid exporter family member 1 (PF06081; HMM-score: 145.4)
    and 5 more
    FUSC_2; Fusaric acid resistance protein-like (PF13515; HMM-score: 19.3)
    no clan defined C9orf72-like; C9orf72-like protein family (PF15019; HMM-score: 15)
    TPR (CL0020) MIF4G; MIF4G domain (PF02854; HMM-score: 12.4)
    FUSC (CL0307) DUF2955; Protein of unknown function (DUF2955) (PF11168; HMM-score: 8.6)
    SLATT (CL0676) SLATT_3; SMODS and SLOG-associating 2TM effector domain 3 (PF18184; HMM-score: 7.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 3
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0017
    • Cytoplasmic Membrane Score: 0.9971
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0012
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.066306
    • TAT(Tat/SPI): 0.016109
    • LIPO(Sec/SPII): 0.014453
  • predicted transmembrane helices (TMHMM): 3

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000028193 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MSISQRTTKLILATCLAYLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAASESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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