PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000102000
• symbol^?: cps2L
• synonym: rfbA
• description^?: glucose-1-phosphate thymidylyltransferase RfbA

  descriptions from strain specific annotations:

  • glucose-1-phosphate thymidylyltransferase RfbA
  • glucose-1-phosphate thymidylyltransferase
  • glucose-1-phosphate thymidyl transferase rmlA
  • Glucose-1-phosphate thymidylyltransferase 1
  • Glucose-1-phosphate thymidylyltransferase Cps2L
  • glucose-1-phosphate thymidylyltransferase RmlA
  • The type 2 capsule locus of Streptococcus pneumoniae
• strand^?: +
• coordinates^?: 84207..85076
• occurrence^?: in 60% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
—
(2)
D39:
SPD_RS01780 (rfbA)
(2)
D39V:
SPV_RS01780 (rfbA)
(19A)
Hungary19A-6:
SPH_RS02265 (rfbA)
(19F)
EF3030:
EF3030_RS01730 (rfbA)
(6B)^?
670-6B:
SP670_RS02150 (rfbA)
(6A)
6A-10:
HKM25_RS01860 (rfbA)
(5)
70585:
—
(19F)
A026:
T308_RS01785 (rfbA)
(3)
A66:
—
(11A)
AP200:
—
(12F)
ASP0581:
—
(19F)
ATCC 49619:
EL263_RS01955 (rfbA)
(23F)
ATCC 700669:
SPN23F_RS01715 (rfbA)
(19F)
BM6001:
ODS73_RS02230 (rfbA)
(1)
BVJ1JL:
JN057_RS01950 (rfbA)
(14)
CGSP14:
—
(19F)
G54:
SPG_RS01650 (rfbA)
(1)
gamPNI0373:
HMPREF1038_RS02030 (rfbA)
(3)
HU-OH:
—
(19A)
Hu15:
SPNHU15_RS02030 (rfbA)
(19A)
Hu17:
SPNHU17_RS01960 (rfbA)
(1)
INV104:
INV104_RS01810 (rfbA)
(14)
INV200:
—
(14)
JJA:
—
(19F)
MDRSPN001:
MDRSPN_RS01740 (rfbA)
(1)
NCTC7465:
AT689_RS00680 (rfbA)
(2)
NCTC7466:
DQM66_RS01780 (rfbA)
(4)
NU83127:
—
(3)
OXC141:
—
(1)
P1031:
SPP_RS01980 (rfbA)
(2)
R6:
SPR_RS01660 (rfbA)
(19A)
SP49:
BMJ42_RS02450 (rfbA)
(1)
SPN032672:
SPN032672_RS08110 (rfbA)
(3)
SPN034156:
—
(3)
SPN034183:
—
(3)
SPN994038:
—
(3)
SPN994039:
—
(3)
SPNA45:
—
(19F)
ST556:
MYY_RS02255 (rfbA)
(19F)
Taiwan19F-14:
SPT_RS02045 (rfbA)
(19A)
TCH8431/19A:
HMPREF0837_RS03210 (rfbA)
(4)
Xen35:
—

⊟Genome Viewer

D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  D39             MKGIILAGGSGTRLYPLTRATSKQLMPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPR
  D39V            MKGIILAGGSGTRLYPLTRATSKQLMPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPR
  Hungary19A-6    MKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPR
  EF3030          MKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIRDILIISTPQDLHR
                  ********************:*************************:*********** *
  
  D39             FKDLLLDGSEFGIRLSYAEQPSPDGLAQAFLIGEDFIGDDSVALILGDNIYHGPGLSKML
  D39V            FKDLLLDGSEFGIRLSYAEQPSPDGLAQAFLIGEDFIGDDSVALILGDNIYHGPGLSKML
  Hungary19A-6    FKDLLLDGSEFGIKLSYAEQPSPDGLAQAFLIGEEFIGDDSVALILGDNIYHGPGLSTML
  EF3030          FQELLQDGSEFGLKLSYAEQPSPDGLAQAFIIGEEFISDDSVALILGDNIYHGSGLSKML
                  *::** ******::****************:***:**.***************.***.**
  
  D39             QKTVSKEKGATVFGYQVKDPERFGVVEFDENMNAISIEEKPECPRSNYAVTGLYFYDNDV
  D39V            QKTVSKEKGATVFGYQVKDPERFGVVEFDENMNAISIEEKPECPRSNYAVTGLYFYDNDV
  Hungary19A-6    QKAAKKEKGATVFGYQVKDPERFGVVEFDTDMNAISIEEKPEYPRSNYAVTGLYFYDNDV
  EF3030          QKAASKESGATVFGYHVKDPERFGVVEFDQDMKAISIEEKPEQPRSNYAVTGLYFYDNDV
                  **:..**.*******:************* :*:********* *****************
  
  D39             VEIAKSIKPSARGELEITDVNKAYLDRGNLSVEVMGRGFAWLDTGTHESLLEASQYIETV
  D39V            VEIAKSIKPSARGELEITDVNKAYLDRGNLSVEVMGRGFAWLDTGTHESLLEASQYIETV
  Hungary19A-6    VEIAKQIKPSARGELEITDVNKAYLNRGDLSVELMGRGFAWLDTGTHESLLEASQYIETV
  EF3030          VEIAKSIKPSPRGELEITDVNKAYLDRGDLSVELMGRGFAWLDTGTHESLLEASQYIETV
                  *****.****.**************:**:****:**************************
  
  D39             QRMQNVQVANLEEIAYRMGYISREDVLELAQPLKKNEYGQYLLRLIGEV
  D39V            QRMQNVQVANLEEIAYRMGYISREDVLELAQPLKKNEYGQYLLRLIGEV
  Hungary19A-6    QRMQNVQVANLEEISYRMGYISREDVLELAQPLKKNEYGQYLLRLIGEA
  EF3030          QRMQNVQVANLEEIAYRMGYISREDVLALAQPLKKNEYGQYLLRLIGEA
                  **************:************ ********************.