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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000138000
- symbol?: —
- synonym:
- description?: ftsX-like permease family protein
- ftsX-like permease family protein
- putative membrane protein
- membrane protein
- membrane protein, putative
- permease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 122510..123733
- occurrence?: in 60% of 43 strains
⊟Orthologs[edit | edit source]
(14)
INV200:
—
(14)
JJA:
—
(19F)
MDRSPN001:
—
(3)
SPNA45:
—
(19F)
ST556:
—
(19F)
Taiwan19F-14:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLRLVYYQFLHNKKQWLGVSPVIFVSSLVMGLAVNGVINVENNSQVFVGLPDPKPIFMFP
D39 MLRLVYYQFLHNKKQWLGVSPVIFVSSLVMGLAVNGVINVENNSQVFVGLPDPKPIFMFP
D39V MLRLVYYQFLHNKKQWLGVSPVIFVSSLVMGLAVNGVINVENNSQVFVGLPDPKPIFMFP
Hungary19A-6 MLRLVYYQFLHNKKQWLGVSPVIFVSSLVMGLAVNGVINVENNSQVFVGLPDPKPIFMFP
************************************************************
TIGR4 IVFGGVTLFFVLSNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAY
D39 IVFGGVTLFFVLSNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAY
D39V IVFGGVTLFFVLSNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAY
Hungary19A-6 IVFGGVTLFFVLSNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAY
************************************************************
TIGR4 LCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLAFLSGCFYTFKKIRN
D39 LCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLAFLSGCFYTFKKIRN
D39V LCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLAFLSGCFYTFKKIRN
Hungary19A-6 LCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLAFLSGCFYTFKKIRN
************************************************************
TIGR4 RKSSKIRHVLSIVKRILLLAGFSVIWLLSLQQIFQDSTILAKAQIIFNIVILDIVIIYQL
D39 RKSSKIRHVLSIVKRILLLAGFSVIWLLSLQQIFQDSTILAKAQIIFNIVILDIVIIYQL
D39V RKSSKIRHVLSIVKRILLLAGFSVIWLLSLQQIFQDSTILAKAQIIFNIVILDIVIIYQL
Hungary19A-6 RKSSKIRHVLSIVKRILLLAGFSVIWLLSLQQIFQDSTILAKAQIIFNIVILDIVIIYQL
************************************************************
TIGR4 SPFIQSCFIKLLSIIIFRNNFMFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQN
D39 SPFIQSCFIKLLSIIIFRNNFMFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQN
D39V SPFIQSCFIKLLSIIIFRNNFMFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQN
Hungary19A-6 SPFIQSCFIKLLSIIIFRNNFMFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQN
************************************************************
TIGR4 ILSQFQDDSDLELKVAFIVYVGAPILIVLANIISIAFLSSHQERIEIQQFEILGTSNYQM
D39 ILSQFQDDSDLELKVAFIVYVGAPILIVLANIISIAFLSSHQERIEIQQFEILGTSNYQM
D39V ILSQFQDDSDLELKVAFIVYVGAPILIVLANIISIAFLSSHQERIEIQQFEILGTSNYQM
Hungary19A-6 ILSQFQDDSDLELKVAFIVYVGAPILIVLANIISIAFLSSHQERIEIQQFEILGTSNYQM
************************************************************
TIGR4 VKIKVGEAIFLTFVTSLIAFLLNIKIMALIYYSLEDILIDDMNLLGLILPNFIVSIILFI
D39 VKIKVGEAIFLTFVTSLIAFLLNIKIMALIYYSLEDILIDDMNLLGLILPNFIVSIILFI
D39V VKIKVGEAIFLTFVTSLIAFLLNIKIMALIYYSLEDILIDDMNLLGLILPNFIVSIILFI
Hungary19A-6 VKIKVGEAIFLTFVTSLIAFLLNIKIMALIYYSLEDILIDDMNLLGLILPNFIVSIILFI
************************************************************
TIGR4 LIFITKSSYFIFKNAKIIS
D39 LIFITKSSYFIFKNAKIIS
D39V LIFITKSSYFIFKNAKIIS
Hungary19A-6 LIFITKSSYFIFKNAKIIS
*******************