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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000230000
- symbol?: ntpA
- synonym:
- description?: v-type ATP synthase subunit A
- v-type ATP synthase subunit A
- V-type ATP synthase alpha chain (V-type ATPase subunitA)
- V-type ATP synthase alpha chain
- V-type sodium ATP synthase subunit A
- V-type sodium ATPase catalytic subunit A
- v-type sodium ATP synthase, subunit A
- Archaeal/vacuolar-type H+-ATPase subunit A
- V-type ATP synthase subunit A (pseudogene)
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 212264..214039
- occurrence?: in 46% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
—
SPN034183:
—
SPN994038:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTQGKIIKVSGPLVIASGMQEANIQDICRVGKLGLIGEIIEMRRDQASIQVYEETSGLGP
Hungary19A-6 MTQGKIIKVSGPLVIASGMQEANIQDICRVGKLGLIGEIIEMRRDQASIQVYEETSGLGP
************************************************************
TIGR4 GEPVVTTGEPLSVELGPGLISQMFDGIQRPLDRFKLATHNDFLVRGVEVPSLDRDIKWHF
Hungary19A-6 GEPVVTTGEPLSVELGPGLISQMFDGIQRPLDRFKLATHNDFLVRGVEVPSLDRDIKWHF
************************************************************
TIGR4 DSTIAIGQKVSTGDILGTVKETEVVNHKIMVPYGVSGEVVSIASGDFTIDEVVYEIKKLD
Hungary19A-6 DSTISIGQKVSTGDILGTVKETEVVNHKIMVPYGISGEVVSIASGDFTIDEVVYEIKKLD
****:*****************************:*************************
TIGR4 GSFYKGTLMQKWPVRKARPVSKRLIPEEPLITGQRVIDAFFPVTKGGAAAVPGPFGAGKT
Hungary19A-6 GSFYKGTLMQKWPVRKARPVSKRLIPEEPLITGQRVIDTFFPVTKGGAAAVPGPFGAGKT
**************************************:*********************
TIGR4 VVQHQVAKFANVDIVIYVGCGERGNEMTDVLNEFPELIDPNTGQSIMQRTVLIANTSNMP
Hungary19A-6 VVQHQVAKFANVDIVIYVGCGERGNEMTDVLNEFPELIDPNTGQSIMQRTVLIANTSNMP
************************************************************
TIGR4 VAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLG
Hungary19A-6 VAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLG
************************************************************
TIGR4 SRIAEYYERAGRSQVLGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPL
Hungary19A-6 SRIAEYYERAGRSQALGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPL
**************.*********************************************
TIGR4 AQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGI
Hungary19A-6 AQRRHFPAINWLTSYSLYKDSVGTYIDDKEKTDWNSKITRAMNYLQRESSLEEIVRLVGI
***************************.********************************
TIGR4 DSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELG
Hungary19A-6 DSLSENERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELG
****:*******************************************************
TIGR4 SYFTEIMEGTVAVRDRMARSKYVSEDRLDEIKIISNEITHQIHLILETGGL
Hungary19A-6 SYFTEIIEGTVAVRDRMARSKYVSEDRLDEIKIISNEITHQIQLILETGGL
******:***********************************:********