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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000484000
- symbol?: phtD
- synonym: phtB
- description?: pneumococcal-type histidine triad protein
- pneumococcal-type histidine triad protein
- putative streptococcal histidine triad protein PhpA
- pneumococcal histidine triad protein B
- pneumococcal histidine triad protein PhtB
- histidine motif-containing protein
- Pneumococcal histidine triad protein D
- Pneumococcal histidine triad protein D precursor
- pneumococcal histidine triad protein PhtD
- histidine triad protein
- pneumococcal histidine triad protein A/B (phtA/B)
- pneumococcal histidine triad protein D truncation
- pneumococcal-type histidine triad potion
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 546898..2468592
- occurrence?: in 61% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| D39 | |
| D39V | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MKINKKYLAGSVAVLALSVCSYELGRHQAGQVKKESNRVSYIDGDQAGQKAENLTPDEVS
D39V MKINKKYLAGSVAVLALSVCSYELGRHQAGQVKKESNRVSYIDGDQAGQKAENLTPDEVS
EF3030 MKINKKYLVGSAAALILSVCSYELGLYQARTV-KENNRVSYIDGKQATQKTENLTPDEVS
********.**.*.* ********* :** * **.********.** **:*********
D39 KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDSDIVN
D39V KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDSDIVN
EF3030 KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIFSEELLMKDPNYKLKDEDIVN
***************************************:***********:***.****
D39 EIKGGYVIKVDGKYYVYLKDAAHADNIRTKEEIKRQKQERSHNHNS---RADNAVAAARA
D39V EIKGGYVIKVDGKYYVYLKDAAHADNIRTKEEIKRQKQERSHNHNS---RADNAVAAARA
EF3030 EVKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHSQHREGGTPRNDGAVALARS
*:************************:******:*****:*::::. * *.*** **:
D39 QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKSDLSASELAAAQAYWNG-----
D39V QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKSDLSASELAAAQAYWNG-----
EF3030 QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAEAFLSGRGNLS
**************************************.:*********:*: .*
D39 ------KQGSRPSSSSSHNANPAQPRLSENHNLTVTPTYHQ-NQGENISSLLRELYAKPL
D39V ------KQGSRPSSSSSHNANPAQPRLSENHNLTVTPTYHQ-NQGENISSLLRELYAKPL
EF3030 NSRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPL
:*.* :* :. .. ::* ::.:. . : * * .*.::*.***::** **
D39 SERHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNH
D39V SERHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNH
EF3030 SQRHVESDGLIFDPAQITSRTARGVAVPHGNHYHFIPYEQMSELEERIARIIPLRYRSNH
*:********************.*******:*******.*:* ***::************
D39 WVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVP
D39V WVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVP
EF3030 WVPDSRPEEPSPQ----PSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEKNGVS
********:**** **************************************:***.
D39 RYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLL
D39V RYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLL
EF3030 RYIPAKNLSAETAAGIDSKLAKQESLSHKLGTKKTDLPSSDREFYNKTYDLLARIHQDLL
******:************************:***************:************
D39 DNKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEI
D39V DNKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEI
EF3030 DNKGRQVDFEALDNLLERLKDVSSDKVKLVEDILAFLAPIRHPERLGKPNAQITYTDDEI
******************************:*****************************
D39 QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
D39V QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
EF3030 QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
************************************************************
D39 KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
D39V KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
EF3030 KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
************************************************************
D39 HYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
D39V HYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
EF3030 HYHNIKFEWFDEGLYEAPKGYTLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
*********************:**************************************
D39 QADTNQTEKPNEEKPQTEKPEEDKEHDEVSEPTHPESDEKENHVGLNPSADNLYKPSTDT
D39V QADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPES------------------PKPTE
EF3030 QADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPES------------------PKPTE
**********************:. ::* .:. :*** *..
D39 EETEEEAEDTTDEAEIPQVEHSVINAKIAEAEALLEKVTDSSIRQNAVETLTGLKSSLLL
D39V EPEEESPEESPEESEEPQVETEKVKEKLREAEDLLGKIQNPIIKSNAKETLTGLKNNLLF
EF3030 EPEEESPEESPEESEEPQVETEKVKEKLREAEDLLGKIQDPIIKSNAKETLTGLKNNLLF
* **..*::.:*:* **** . :: *: *** ** *: :. *:.** *******..**:
D39 GTKDNNTISAEVDSLLALLKESQPTPIQ
D39V GTQDNNTIMAEAEKLLALLKESK-----
EF3030 GTQDNNTIMAEAEKLLALLKENK-----
**:***** **.:.*******.: