Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000648000
- symbol?: yeiH
- synonym:
- description?: YeiH family protein
- YeiH family protein
- membrane protein
- putative membrane protein
- membrane protein Spr0034
- Conserved hypothetical protein
- membrane protein, putative
- Putative membrane protein YeiH
- conserved hypothetical 698 family protein
- Predicted membrane protein
- putative membrane protein (pseudogene)
- putative sulfate exporter family transporter
- uncharacterized membrane protein family UPF0324
- UPF0324 membrane protein
- YeiH family putative sulfate export transporter
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 751709..752719
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSFLSKNGAGILACLLISILSWYLGGFFPVVGAPVFAIFIGMLLHPFLSSYKQLDAGLTF
D39 MSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTF
D39V MSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTF
Hungary19A-6 MSFLSKNGAGILVCLLISIVSWYLGGFFPVIGAPVFAIFMGMLLHPFLSSYKQLDVGLTF
EF3030 MSFLSKNGAGILVCLLISIVSWYLGGFFPVIGAPVFAIFMGMLLHPFLSSYKQLDVGLTF
************.******:**********:********:***************.****
TIGR4 SSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATL
D39 SSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATL
D39V SSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATL
Hungary19A-6 SSKKLLQYAVILLGFGLNISQVFAVGQSSLPVILSTISIALIVAYLFQRFFALDTKLATL
EF3030 SSKKLLQYAVILLGFGLNISQVFAVGQSSLPVILSTISIALIVAYLFQRFFALDTKLATL
**********:*******************************:*****************
TIGR4 VGVGSSICGGSAIAATAPVIDAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFA
D39 VGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFA
D39V VGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFA
Hungary19A-6 IGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNDGFA
EF3030 IGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSSDGFA
:*******************.**********************************.:***
TIGR4 LFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN
D39 LFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN
D39V LFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN
Hungary19A-6 LFAGTAVNDTSSVTATASAWDSLYQTNTLESATIVKLTRTLAIIPITLFLSYWQSREQKN
EF3030 LFAGTAVNDTSSVTATASAWDSLYQTNTLESATIVKLTRTLAIIPITLFLSYWQSREQKN
***************:*********:******************************:*:*
TIGR4 KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKELSKFLIVMAMSAIGLKTN
D39 KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTN
D39V KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTN
Hungary19A-6 KQGLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIIMAMSAIGLKTN
EF3030 KQGLQLKKVFPLFILHFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIIMAMSAIGLKTN
**.************:*************************:******:***********
TIGR4 LVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
D39 LVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
D39V LVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
Hungary19A-6 LVAMVKSSGKSIVLGAVCWIAIILTSLGMQTLIGIF
EF3030 LVAMVKSSGKSIVLGAVCWIAIILTSLGMQTLIGIF
************:***:********:**********