Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000654000
- symbol?: blpK
- synonym: blpU
- description?: bacteriocin-like peptide BlpU
- bacteriocin-like peptide BlpU
- conserved domain protein
- bacteriocin BlpO
- bacteriocin BlpO (pseudogene)
- bacteriocin BlpU
- bacteriocin
- bacteriocin class II family protein
- Amphipathic pore-forming peptide precursor
- class IIb bacteriocin, lactobin A/cerein 7B family
- ComC/BlpC family peptide pheromone/bacteriocin
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 757438..757671
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
SPN034183:
SPN034183_RS00465 (blpU)
SPN994038:
SPN994038_RS00470 (blpU)
SPN994039:
SPN994039_RS00465 (blpU)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNTKTMSQFEIMDTEMLACVEGGGCNWGDFAKAGVGGGAARGLQLGIKTRTWQGAATGAV
D39 MNTKKMSQFEIMDTEMLACVEGGGCNWGDFAKAGVGGGAVRGLQLGIKTRTWQGAATGAA
D39V MNTKKMSQFEIMDTEMLACVEGGGCNWGDFAKAGVGGGAVRGLQLGIKTRTWQGAATGAA
Hungary19A-6 MNTKKMSQFEIMDTEMLACVEGGGCNWGDFAKAGVGGGAVRGLQLGIKTRTWQGAATGAA
EF3030 MNTKKMSQFEIMDTEMLACVEGGGCNWGDFAKAGVGGGAVRGLQLGIKTRTWQGAATGAA
****.**********************************.*******************.
TIGR4 GGAILGGVAYAATCWW
D39 GGAILGGVAYAATCWW
D39V GGAILGGVAYAATCWW
Hungary19A-6 GGAILGGVAYAATCWW
EF3030 GGAILGGVAYAATCWW
****************