PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000750000
• symbol^?: sdhA
• synonym: sdaAA
• description^?: L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha

  descriptions from strain specific annotations:

  • L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
  • L-serine dehydratase, iron-sulfur-dependent, alpha subunit
  • putative L-serine dehydratase, alpha chain
  • L-serine dehydratase, alpha chain
  • L-serine dehydratase, alpha subunit
  • L-serine dehydratase, iron-sulfur-dependent subunit alpha
  • L-serine deaminase
  • L-serine dehydratase%2C alpha subunit
  • L-serine dehydratase alpha subunit
  • serine dehydratase
  • serine dehydratase subunit alpha
• strand^?: -
• coordinates^?: 869779..870651
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS00535 (sdaAA)
(2)
D39:
SPD_RS00545 (sdaAA)
(2)
D39V:
SPV_RS00545 (sdaAA)
(19A)
Hungary19A-6:
SPH_RS00985 (sdaAA)
(19F)
EF3030:
EF3030_RS00535 (sdaAA)
(6B)^?
670-6B:
SP670_RS00885 (sdaAA)
(6A)
6A-10:
HKM25_RS00625 (sdaAA)
(5)
70585:
SP70585_RS00815 (sdaAA)
(19F)
A026:
T308_RS00440 (sdaAA)
(3)
A66:
A66_RS00545 (sdaAA)
(11A)
AP200:
SPAP_RS00740 (sdaAA)
(12F)
ASP0581:
EL334_RS00595 (sdaAA)
(19F)
ATCC 49619:
EL263_RS00755 (sdaAA)
(23F)
ATCC 700669:
SPN23F_RS00595 (sdaAA)
(19F)
BM6001:
ODS73_RS00905 (sdaAA)
(1)
BVJ1JL:
JN057_RS00790 (sdaAA)
(14)
CGSP14:
SPCG_RS00535 (sdaAA)
(19F)
G54:
SPG_RS00510 (sdaAA)
(1)
gamPNI0373:
HMPREF1038_RS00805 (sdaAA)
(3)
HU-OH:
EL271_RS00545 (sdaAA)
(19A)
Hu15:
SPNHU15_RS08105 (sdaAA)
(19A)
Hu17:
SPNHU17_RS00735 (sdaAA)
(1)
INV104:
INV104_RS00515 (sdaAA)
(14)
INV200:
SPNINV200_RS00525 (sdaAA)
(14)
JJA:
SPJ_RS00635 (sdaAA)
(19F)
MDRSPN001:
MDRSPN_RS00555 (sdaAA)
(1)
NCTC7465:
AT689_RS01895 (sdaAA)
(2)
NCTC7466:
DQM66_RS00545 (sdaAA)
(4)
NU83127:
EL277_RS00535 (sdaAA)
(3)
OXC141:
SPNOXC_RS00755 (sdaAA)
(1)
P1031:
SPP_RS00795 (sdaAA)
(2)
R6:
SPR_RS00520 (sdaAA)
(19A)
SP49:
BMJ42_RS01095 (sdaAA)
(1)
SPN032672:
SPN032672_RS06790 (sdaAA)
(3)
SPN034156:
SPN034156_RS06735 (sdaAA)
(3)
SPN034183:
SPN034183_RS00750 (sdaAA)
(3)
SPN994038:
SPN994038_RS00755 (sdaAA)
(3)
SPN994039:
SPN994039_RS00750 (sdaAA)
(3)
SPNA45:
SPNA45_RS10770 (sdaAA)
(19F)
ST556:
MYY_RS00915 (sdaAA)
(19F)
Taiwan19F-14:
SPT_RS00705 (sdaAA)
(19A)
TCH8431/19A:
HMPREF0837_RS01980 (sdaAA)
(4)
Xen35:
CXP32_RS00550 (sdaAA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNE
  D39             MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNE
  D39V            MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNE
  Hungary19A-6    MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNE
  EF3030          MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNE
                  ************************************************************
  
  TIGR4           NKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAG
  D39             NKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAG
  D39V            NKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAG
  Hungary19A-6    NKSRSGLTGGDAAKLDHYIKNEKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAG
  EF3030          NKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAG
                  *******************:* **************************************
  
  TIGR4           CLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAA
  D39             CLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAA
  D39V            CLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAA
  Hungary19A-6    CLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAA
  EF3030          CLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAA
                  ************************************************************
  
  TIGR4           ALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALA
  D39             ALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALA
  D39V            ALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALA
  Hungary19A-6    ALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALA
  EF3030          ALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALA
                  ************************************************************
  
  TIGR4           GIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
  D39             GIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
  D39V            GIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
  Hungary19A-6    GIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
  EF3030          GIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
                  **************************************************