PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000825000
• symbol^?: cibA
• synonym:
• description^?: fratricide two-peptide bacteriocin subunit CibA

  descriptions from strain specific annotations:

  • fratricide two-peptide bacteriocin subunit CibA
  • putative membrane protein
  • conserved hypothetical protein
  • class IIb bacteriocin, lactobin A/cerein 7B family
  • class IIb bacteriocin, lactobin A/cerein 7B family protein
  • excreted peptide
  • Two-peptide bacteriocin peptide CibA
  • competence induced bacteriocin A CibA
• strand^?: -
• coordinates^?: 987775..987960
• occurrence^?: in 98% of 41 strains

⊟Orthologs

TIGR4:
SP_RS00640 (cibA)
D39:
SPD_RS00740 (cibA)
D39V:
SPV_RS00740 (cibA)
Hungary19A-6:
SPH_RS01155 (cibA)
EF3030:
EF3030_RS00705 (cibA)
670-6B:
SP670_RS01060 (cibA)
6A-10:
HKM25_RS00770 (cibA)
70585:
SP70585_RS00995 (cibA)
A026:
T308_RS00615 (cibA)
A66:
A66_RS00720 (cibA)
AP200:
SPAP_RS00905 (cibA)
ASP0581:
EL334_RS00745 (cibA)
ATCC 49619:
EL263_RS00920 (cibA)
ATCC 700669:
SPN23F_RS00720 (cibA)
BVJ1JL:
JN057_RS00920 (cibA)
CGSP14:
SPCG_RS00700 (cibA)
G54:
SPG_RS00670 (cibA)
gamPNI0373:
HMPREF1038_RS00955 (cibA)
HU-OH:
EL271_RS00715 (cibA)
Hu15:
SPNHU15_RS08255 (cibA)
Hu17:
SPNHU17_RS00885 (cibA)
INV104:
INV104_RS00645 (cibA)
INV200:
SPNINV200_RS00680 (cibA)
JJA:
SPJ_RS00780 (cibA)
MDRSPN001:
—
NCTC7466:
DQM66_RS00740 (cibA)
NU83127:
EL277_RS00720 (cibA)
OXC141:
SPNOXC_RS00955 (cibA)
P1031:
SPP_RS00950 (cibA)
R6:
SPR_RS00700 (cibA)
SP49:
BMJ42_RS01265 (cibA)
SPN032672:
SPN032672_RS06930 (cibA)
SPN034156:
SPN034156_RS06890 (cibA)
SPN034183:
SPN034183_RS00960 (cibA)
SPN994038:
SPN994038_RS00890 (cibA)
SPN994039:
SPN994039_RS00885 (cibA)
SPNA45:
SPNA45_RS10605 (cibA)
ST556:
MYY_RS01090 (cibA)
Taiwan19F-14:
SPT_RS00880 (cibA)
TCH8431/19A:
HMPREF0837_RS02155 (cibA)
Xen35:
CXP32_RS00665 (cibA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGG
  D39             MTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGG
  D39V            MTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGG
  Hungary19A-6    MTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGG
  EF3030          MTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGG
                  ************************************************************
  
  TIGR4           D
  D39             D
  D39V            D
  Hungary19A-6    D
  EF3030          D
                  *