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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000837000
- symbol?: vpoB
- synonym:
- description?: CPBP family intramembrane glutamic endopeptidase
- CPBP family intramembrane glutamic endopeptidase
- caax amino protease family
- putative membrane protease (pseudogene)
- putative membrane protease
- CPBP family intramembrane metalloprotease
- putative metal-dependent membrane protease
- CAAX amino terminal protease family protein
- lysostaphin resistance A-like protein
- (Putative) Abi family transmembrane protease
- CAAX amino protease
- CAAX amino terminal protease family
- CAAX protease
- CAAX protease self-immunity family protein
- Predicted metal-dependent membrane protease
- putative membrane protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 990955..998097
- occurrence?: in 95% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKIISHRYFIIVFLLVIADQKFSVLVLRSDLVTGLSDFAYYLSDMMLNFLVVLFALIAM
D39 MKKIISHRYFIIVFLLVIADQKFSVLVLRSDLVAGLSDFAYYLSDMMLNFLVVLFALIAM
D39V MKKIISHRYFIIVFLLVIADQKFSVLVLRSDLVAGLSDFAYYLSDMMLNFLVVLFALIAM
Hungary19A-6 MKKIISHRYFIIVFLLVIADQKFSVLVLRSDLVAGLSDFAYYLSDMMLNFLVVLFALIAM
EF3030 MKKIISHRYFIIVFLLVIADQKFSALVLRSDLVTGLSDFAYYLSDMMLNFLVVLFALIAM
************************.********:**************************
TIGR4 IWSGKWQKINSRKFKGSYLFYSFLALLAFVVWNFVTFFLFPPTRNEISYQHAAPTFTGAT
D39 IWSGKWQKINSRKFKGSYLFYSFLALLAFVAWNFVTFFLFPPTRNEISYQHAAPTFTGAT
D39V IWSGKWQKINSRKFKGSYLFYSFLALLAFVAWNFVTFFLFPPTRNEISYQHAAPTFTGAT
Hungary19A-6 IWSGKWQKINSRKFKGSYLFYSFLALLAFVAWNFVTFFLFPPTRNEISYQHAAPTFTGAT
EF3030 IWSGKWQKINSRKFKGSYLFYSFLALLAFVVWNFVTFFLFPPTRNEISYQHAAPTFTGAT
******************************.*****************************
TIGR4 AFLMYFFYPVIAGPIFEDMIYRGLVMTALEKGKKWGLDVLGSAVLFGVSHISNHGWVLTD
D39 AFLMYFFYPVIAGPIFEDMIYRGLVMTALEKGKKWGLDVLGSAVLFGVSHISNHGWVLTD
D39V AFLMYFFYPVIAGPIFEDMIYRGLVMTALEKGKKWGLDVLGSAVLFGVSHISNHGWVLTD
Hungary19A-6 AFLMYFFYPVIAGPIFEDMIYRGLVMTALEKGKKWGLDVLGSAVLFGVSHISNHGWVLTD
EF3030 AFLMYFFYPVIVGPIFEEIIHRGLVMTALEKGKKWGLDVLGSAVLFGVSHISNHGWVLTD
***********.*****::*:***************************************
TIGR4 FVFYMGGGLIFAVLFRMTKSIYWPIGLHIVYNGIGQLLMLL
D39 FVFYMGGGLIFAVLFRMTKSIYWPIGLHIVYNGIGQLLMLL
D39V FVFYMGGGLIFAVLFRMTKSIYWPIGLHIVYNGIGQLLMLL
Hungary19A-6 FVFYMGGGLIFAVLFRMTKSIYWPIGLHIVYNGIGQLLMLL
EF3030 FFVYMGGGLIFAVLFRMTKSIYWPIGLHIVYNGIGQLLMLL
*..**************************************