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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000864000
- symbol?: azlC
- synonym:
- description?: AzlC family ABC transporter permease
- AzlC family ABC transporter permease
- branched-chain amino acid permease
- putative AzlC-family transport protein
- AzlC family protein
- Inner membrane protein YgaZ
- AzlC protein
- Branched-chain amino acid transport protein AzlC
- conserved hypothetical protein
- branched-chain amino acid ABC transporter permease
- Predicted branched-chain amino acid permease (azaleucine resistance)
- putative AzlC-family transport protein (pseudogene)
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1019478..1020974
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MPTALGYVSIGLACGIIGAPYVTPVEMGLMSLFVYAGSAQFAMLALIVVQAPVAAIAMTV
D39 -----------------------------------------------MVQAPVAAIAMTV
D39V -----------------------------------------------MVQAPVAAIAMTV
Hungary19A-6 MPTALGYVSIGLACGTIGAPYVTPVEMGLMSLFVYAGSAQFAMLALIVVQAPVAAIAMTV
EF3030 MPTALGYVSIGLACGIIGVPYVTLVEMGLMSLFVYAGSAQFAMLALIVVQAPVTAIAMTV
:*****:******
TIGR4 FLINLRLFLLSLHASTYFRHTSLWYNIGMSSILTDETYGVLMGELAHTDKVNPMWMHGNN
D39 FLINLRLFLLSLHASTYFRHTSLWYNIGMSSILTDETYGVLMGELAHTDKVNPMWMHGNN
D39V FLINLRLFLLSLHASTYFRHTSLWYNIGMSSILTDETYGVLMGELAHTDKVNPMWMHGNN
Hungary19A-6 FLINLRLFLLSLHASTYFRHTSLWYNIGMSSILTDETYGVLMGELAHTDKVNPMWMHGNN
EF3030 FLINLRLFLLSLHASTYFRHTSLWYNIGMSSILTDETYGVLMGELAHTDKVNPMWMHGNN
************************************************************
TIGR4 LNSYVAWFVGTVVGTALGGLLPNPEIFGLDFALVGM-------------FIGIFASQFQI
D39 LNSYVAWFVGTVVGTALGGLLPNPEIFALILSSVVTGKVGSLPQIKWLDFLAVFPTAWVA
D39V LNSYVAWFVGTVVGTALGGLLPNPEIFALILSSVVTGKVGSLPQIKWLDFLAVFPTAWVA
Hungary19A-6 LNSYVAWFVGTVVGTALGGLLPNPEIFGLDFALVGM-------------FIGIFASQFQI
EF3030 LNSYVAWFVGTVVGTALGGLLPNPEIFALILSSVVTGKVGSLPQIKWLDFLAVFPTAWVA
***************************.* :: * *:.:*.: :
TIGR4 MQRRIPVRNLLIILAVVAVSFFLLLTVMSQSLAVLFATLLGCSMGVVLDGQ
D39 FRYRNLVGTVLFGVVLIAI------------LRLVF---------------
D39V FRYRNLVGTVLFGVVLIAI------------LRLVF---------------
Hungary19A-6 MQRRIPVRNLLIILAVVAVSFFLLLTVVSQSLAVLFATLLGCSMGVVLDGQ
EF3030 FRYRNLVGTVLFGVVLIAV------------LRLVF---------------
:: * * .:*: :.::*: * ::*