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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000880000
- symbol?: —
- synonym:
- description?: LytTR family DNA-binding domain-containing protein
- LytTR family DNA-binding domain-containing protein
- putative DNA-binding protein
- response regulator of the LytR/AlgR family
- DNA-binding protein
- putative HTH-type transcriptional regulator
- response regulator
- Conserved hypothetical protein
- LytTr DNA-binding domain protein
- conserved domain protein
- DNA-binding response regulator
- Glutamate synthase [NADPH] large chain
- LytR/AlgR family response regulator
- response regulator transcription factor
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1036972..1037412
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
D39 MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
D39V MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
Hungary19A-6 MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
EF3030 MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
********************** *:***********************************
TIGR4 RFYIENRKVLAETASQTYSIDLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLV
D39 RFYIENRKVLAETASQTYSIDLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLV
D39V RFYIENRKVLAETASQTYSIDLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLV
Hungary19A-6 RFYIENRKVLAETASQTYSIDLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLV
EF3030 RFYIENRKVLAETASQTYSIDLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLV
********************************:***************************
TIGR4 EIFLKNESFTYSSRRYLKTIKEKLEL
D39 EIFLKNESFTYSSRRYLKTIKEKLEL
D39V EIFLKNESFTYSSRRYLKTIKEKLEL
Hungary19A-6 EIFLKNESFTYSSRRYLKTIKEKLEL
EF3030 EIFLKNESFTYSSRRYLKTIKEKLEL
**************************