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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000971000
- symbol?: pitB
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- probable ATP-binding component of ABC transporter
- lactose transport ATP-binding protein LacK
- ABC transporter, ATP-binding protein
- ATP-binding component of ABC transporter
- Maltose/maltodextrin import ATP-binding protein
- ABC transporter ATP-binding protein - iron transport
- ABC transporter family protein
- ABC-type spermidine/putrescine transport systems, ATPase component
- ATPase of iron uptake system PitABCD
- Fe(3+) ions import ATP-binding protein FbpC
- iron ABC transporter, ATP-binding protein
- peptide ABC transporter substrate-binding protein
- spermidine/putrescine ABC transporter ATP-binding protein
- Spermidine/putrescine import ATP-binding protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1138330..1139422
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSEIKIINAKKIYHDVPVIENLNITIPKGSLFTLLGASGCGKTTLLRMIAGFNSIEGGEF
D39 MSEIEIINAKKIYHDVPVIENLNITIPKGSLFTLLGASGCGKTTLLRMIAGFNSIKDGEF
D39V MSEIEIINAKKIYHDVPVIENLNITIPKGSLFTLLGASGCGKTTLLRMIAGFNSIKDGEF
Hungary19A-6 MSEIEIINAKKIYHDVPVIENLNITIPKGSLFTLLGASGCGKTTLLRMIAGFNSIKDGEF
****:**************************************************:.***
TIGR4 YFDDTKINNMEPSKRNIGMVFQNYAIFPHLTVRDNVAFGLMQKKVPKEELIQQTNKYLEL
D39 YFDDTKINNMEPSKRNIGLVFQNYAIFPHLTVRDNVAFGLMQKKVPKEELIQQTNKYLEL
D39V YFDDTKINNMEPSKRNIGLVFQNYAIFPHLTVRDNVAFGLMQKKVPKEELIQQTNKYLEL
Hungary19A-6 YFDDTKINNMEPSKRNIGMVFQNYAIFPHLTVRDNVAFGLMQKKVPKEELIQQTNKYLEL
******************:*****************************************
TIGR4 MQIAQYADRKPDKLSGGQQQRVTLACALAVNPSVLLMDEPLSNLEAKLRLDMRQAIREIQ
D39 MQIAQYADRKPDKLSGGQQQRVTLACALAVNPSVLLMDEPLSNLEAKLRLDMRQTIREIQ
D39V MQIAQYADRKPDKLSGGQQQRVTLACALAVNPSVLLMDEPLSNLEAKLRLDMRQTIREIQ
Hungary19A-6 MQIAQYADRKPDKLSGGQQQRVTLACALAVNLSVLLMDEPLSNLEAKLRLDMRQAIREIQ
******************************* **********************:*****
TIGR4 HEVGITTVYVTHDQEEAMAISDQIAVMKDGVIQQIGRPKELYHKPANEFVATFIGRTNII
D39 HEVGITTVYVTHDQEEAMAISDQIAVMKDGVIQQIGRPKELYHKPANEFVATFIGRTNII
D39V HEVGITTVYVTHDQEEAMAISDQIAVMKDGVIQQIGRPKELYHKPANEFVATFIGRTNII
Hungary19A-6 HEVGITTVYVTHDQEEAMAISDQIAVMKDGVIQQIGRPKELYHKPANEFVATFIGRTNII
************************************************************
TIGR4 PANLEKRSDGAYIVFSDGYALRMPALDQVEEQAIHVSIRPEEFIKDESGDIEGTIRDSVY
D39 PANLEKRSDGAYIVFSDGYALRMPALDQVEEQAIHVSIRPEEFIKDESGDIEGTIRDSVY
D39V PANLEKRSDGAYIVFSDGYALRMPALDQVEEQAIHVSIRPEEFIKDESGDIEGTIRDSVY
Hungary19A-6 PANLEKRSDGAYIVFSDGYALRMLALDQVEEQAIHVSIRPEEFIKDESGDIEGTISDSVY
*********************** ******************************* ****
TIGR4 LGLNTDYFIETGFASKIQVSEESTFEEDLQKGNRIRLRINTQKLNIFSADGSQNLIKGVN
D39 LGLNTDYFIETGFASKIQVSEESTFEEELQKGNRIRLRINTQKLNIFSADGSQNLIKGVN
D39V LGLNTDYFIETGFASKIQVSEESTFEEELQKGNRIRLRINTQKLNIFSADGSQNLIKGVN
Hungary19A-6 LGLNTEYFIETGFASKIQVSEESTFEEDLQKGNRIRLRINTQKLTIFSADGSQNLIKGVN
*****:*********************:****************.***************
TIGR4 HGT
D39 HGT
D39V HGT
Hungary19A-6 HGT
***