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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000979000
- symbol?: deoR
- synonym: pflR
- description?: DeoR/GlpR family DNA-binding transcription regulator
- DeoR/GlpR family DNA-binding transcription regulator
- DeoR family regulatory protein
- putative HTH-type transcriptional regulator YciT
- DeoR family transcriptional regulator
- transcriptional regulator, DeoR family
- Glucitol operon repressor
- DeoR/GlpR transcriptional regulator
- DeoR faimly transcriptional regulator
- DEOR-type transcriptional regulator
- DNA-binding transcriptional regulator
- putative HTH-type transcriptional regulator YdjF
- transcriptional regulator
- transcriptional regulator, DeoR family protein
- Transcriptional regulators of sugar metabolism
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1143368..1144114
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKRLEQIIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDD
D39 MKRLEQIIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDD
D39V MKRLEQIIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDD
Hungary19A-6 MKRLEQIIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDD
EF3030 MKRLEQIIKLVSEYEKIDVNTLSEKLNVSKVTIRKDLDKLESKGLLHREHGYAVLNSGDD
************************************************************
TIGR4 LNVRLSINYETKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFI
D39 LNVRLSINYEIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFI
D39V LNVRLSINYEIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFI
Hungary19A-6 LNVRLSINYEIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFI
EF3030 LNVRLSINYETKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFI
********** *************************************************
TIGR4 ANFVRAYDSCRVIVLGGEFQKDSQVTVGPLLKEMIQTFHVCQAFVGTDGYDKEMGFTGKD
D39 ANFVRAYDSCRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKD
D39V ANFVRAYDSCRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKD
Hungary19A-6 ANFVRAYDSCRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKD
EF3030 ANFVRAYDSCRVIVLGGEFQKDSQVTVGPLLKEMIQTFHVCQAFVGTDGYDKEMGFTGKD
***********:**************************** *******************
TIGR4 LMRSEVVQYISAVSDKVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLSKQNIATLENA
D39 LMRSEVVQYISAASDKVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLSKQNIATLENA
D39V LMRSEVVQYISAASDKVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLSKQNIATLENA
Hungary19A-6 LMRSEVVQYISAASDKVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLSKQNIATLENA
EF3030 LMRSEVVQYISAVSDKVIVLTDSSKFDKRGTVRRFALSQVYEVITDEKLSKQNIATLENA
************.***********************************************
TIGR4 GIMVKVVS
D39 GIMVKVVS
D39V GIMVKVVS
Hungary19A-6 GIMVKVVS
EF3030 GIMVKVVS
********