PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001034000
• symbol^?: rplM
• synonym:
• description^?: 50S Ribosomal protein L13

  descriptions from strain specific annotations:

  • 50S Ribosomal protein L13
  • ribosomal protein L13
  • LSU ribosomal protein L13p (L13Ae)
  • pseudogene
• strand^?: +
• coordinates^?: 1211469..1211916
• occurrence^?: in 100% of 43 strains

⊟Orthologs

TIGR4:
SP_RS01445 (rplM)
D39:
SPD_RS01490 (rplM)
D39V:
SPV_RS01490 (rplM)
Hungary19A-6:
SPH_RS02005 (rplM)
EF3030:
EF3030_RS01480 (rplM)
670-6B:
SP670_RS01855 (rplM)
6A-10:
HKM25_RS01495 (rplM)
70585:
SP70585_RS01750 (rplM)
A026:
T308_RS01450 (rplM)
A66:
A66_RS01490 (rplM)
AP200:
SPAP_RS01680 (rplM)
ASP0581:
EL334_RS01570 (rplM)
ATCC 49619:
EL263_RS01700 (rplM)
ATCC 700669:
SPN23F_RS01475 (rplM)
BM6001:
ODS73_RS01900 (rplM)
BVJ1JL:
JN057_RS01655 (rplM)
CGSP14:
SPCG_RS01595 (rplM)
G54:
SPG_RS11120 (rplM)
gamPNI0373:
HMPREF1038_RS01725 (rplM)
HU-OH:
EL271_RS01480 (rplM)
Hu15:
SPNHU15_RS01775 (rplM)
Hu17:
SPNHU17_RS01705 (rplM)
INV104:
INV104_RS01465 (rplM)
INV200:
SPNINV200_RS01475 (rplM)
JJA:
SPJ_RS01530 (rplM)
MDRSPN001:
MDRSPN_RS01465 (rplM)
NCTC7465:
AT689_RS00980 (rplM)
NCTC7466:
DQM66_RS01490 (rplM)
NU83127:
EL277_RS01540 (rplM)
OXC141:
SPNOXC_RS01715 (rplM)
P1031:
SPP_RS01715 (rplM)
R6:
SPR_RS01415 (rplM)
SP49:
BMJ42_RS02170 (rplM)
SPN032672:
SPN032672_RS07745 (rplM)
SPN034156:
SPN034156_RS07640 (rplM)
SPN034183:
SPN034183_RS01725 (rplM)
SPN994038:
SPN994038_RS01650 (rplM)
SPN994039:
SPN994039_RS01645 (rplM)
SPNA45:
SPNA45_RS09740 (rplM)
ST556:
MYY_RS01925 (rplM)
Taiwan19F-14:
SPT_RS01720 (rplM)
TCH8431/19A:
HMPREF0837_RS02985 (rplM)
Xen35:
CXP32_RS01480 (rplM)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN
  D39             MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN
  D39V            MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN
  Hungary19A-6    MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN
  EF3030          MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN
                  ************************************************************
  
  TIGR4           AEKVKLTGKKATDKIYYTHSNHPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ
  D39             AEKVKLTGKKATDKIYYTHSNHPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ
  D39V            AEKVKLTGKKATDKIYYTHSNHPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ
  Hungary19A-6    AEKVKLTGKKATDKIYYTHSNHPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ
  EF3030          AEKVKLTGKKATDKIYYTHSNHPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ
                  ************************************************************
  
  TIGR4           GMKLKVFVGAEHTHAAQQPEVLDISGLI
  D39             GMKLKVFVGAEHTHAAQQPEVLDISGLI
  D39V            GMKLKVFVGAEHTHAAQQPEVLDISGLI
  Hungary19A-6    GMKLKVFVGAEHTHAAQQPEVLDISGLI
  EF3030          GMKLKVFVGAEHTHAAQQPEVLDISGLI
                  ****************************