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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001062000
- symbol?: xylS
- synonym:
- description?: glycoside hydrolase family 31 protein
- glycoside hydrolase family 31 protein
- glycosyl hydrolase, family 31
- Alpha-xylosidase
- putative glycosylhydrolase
- Oligosaccharide 4-alpha-D-glucosyltransferase
- Maltodextrin glucosidase
- Alpha-glucosidase, family 31 of glycosyl hydrolases
- glycosyl hydrolase%2C family 31
- glycosyl hydrolase, family protein 31
- glycosyl hydrolases 31 family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1262435..1264648
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKIFKGEFYRISVLTDKLVRLEYSQTGSFEDRTTQLIYNRDFGQISLDYIETSNVLDIMT
D39 MKIFKGEFYRISVLTDKLVRLEYSQTGSFEDRTTQLIYNRDFGQISLDYIETSNVLDIMT
D39V MKIFKGEFYRISVLTDKLVRLEYSQTGSFEDRTTQLIYNRDFGQISLDYIETSNVLDIMT
Hungary19A-6 MKIFKGEFYRISVLTDKLVRLEYSRTGNFEDRTTQLIYNRDFGQISLDYIETSNVLDIMT
EF3030 MKIFKGEFYRISVLTDKLVRLEYSQTGNFEDRTTQLIYNRDFGQVSLDYIETSNVLDIMT
************************:**.****************:***************
TIGR4 DYFHLHFNKGEFNAENLFIELKGNFAVYGSRWYFGESIETLKGTARTLDKADGAISLEDG
D39 DYFHLHFNKGEFNAENLFIELKGNFAVYGSRWYFGESIETLKGTARTLDKADGAISLEDG
D39V DYFHLHFNKGEFNAENLFIELKGNFAVYGSRWYFGESIETLKGTARTLDKADGAISLEDG
Hungary19A-6 DYFHLHFNKGEFNAENLFIELKGNFAVYGSRWYFGESIETLKGTARTLDKADGAISLEDG
EF3030 DYFHLHFNKGEFNAENLFIELKGNFAVYGSRWYFGESIETLKGTARTLDKADGAISLEDG
************************************************************
TIGR4 IISRNGIALLDDSQGFIWDEQSGYIERENQIDLYFFAYGHDYRGAIRDFYHLTGSTPLLP
D39 IISRNGIALLDDSQGFIWDEQSGYIERENQIDLYFFAYGHDYRGAIRDFYHLTGSTPLLP
D39V IISRNGIALLDDSQGFIWDEQSGYIERENQIDLYFFAYGHDYRGAIRDFYHLTGSTPLLP
Hungary19A-6 IISRNGIALLDDSQGFIWDEQSGYIERENQIDLYFFAYGHDYRGAIRDFYHLTGSTPLLP
EF3030 IISRNGIALLDDSQGFIWDEQSGYIERENQIDLYFFAYGHDYRGAIRDFYHLTGSTPLLP
************************************************************
TIGR4 RYALGNWWSRYWPYTSDEYLDLIDRFETEKIPLSIGVLDMDWHITDIPARFGSGWTGYSW
D39 RYALGNWWSRYWPYTSDEYLDLIDRFETEKIPLSIGVLDMDWHITDIPARFGSGWTGYSW
D39V RYALGNWWSRYWPYTSDEYLDLIDRFETEKIPLSIGVLDMDWHITDIPARFGSGWTGYSW
Hungary19A-6 RYALGNWWSRYWPYTSDEYLDLIDRFETEKIPLSIGVLDMDWHITDIPARFGSGWTGYSW
EF3030 RYALGNWWSRYWPYTSDEYLDLIDRFETEKIPLSIGVLDMDWHITDIPARFGSGWTGYSW
************************************************************
TIGR4 NRNLIPNPEQLLQQLHDRKLKLSLNVHPADGIRAYEEAYPQIAKRLGLNVELEEPAIFDF
D39 NRNLIPNPEQLLQQLHDRKLKLSLNVHPADGIRAYEEAYPQIAKRLGLNVELEEPAIFDF
D39V NRNLIPNPEQLLQQLHDRKLKLSLNVHPADGIRAYEEAYPQIAKRLGLNVELEEPAIFDF
Hungary19A-6 NRNLIPNPEQLLQQLHDRKLKLSLNVHPADGIRAYEEAYPQVAKRLGLNVELEEPAIFDF
EF3030 NRNLIPNPEQLLQQLHDRKLKLSLNVHPADGIRAYEEAYPQIAKRLGLNVELEEPAIFDF
*****************************************:******************
TIGR4 FNPSFREAYFKDVHYELEKQGVDFWWIDWQQGTQGMLDPLWLLNHYHYQDSCKNAEGGLI
D39 FNPSFREAYFKDVHYELEKQGVDFWWIDWQQGTQGMLDPLWLLNHYHYQDSCKNAEGGLI
D39V FNPSFREAYFKDVHYELEKQGVDFWWIDWQQGTQGMLDPLWLLNHYHYQDSCKNAEGGLI
Hungary19A-6 FNPSFREAYFKDVHYELEKQGVDFWWIDWQQGTQGILDPLWLLNHYHYQDSCKNAEGGLI
EF3030 FNPSFREAYFKDVHYELEKQGVDFWWIDWQQGTQGMLDPLWLLNHYHYQDSCKNAEGGLI
***********************************:************************
TIGR4 LSRYAGPGSHRYPVGFSGDTIISWNSLRFQPYFTATASNIGYSWWSHDIGGHMLGDYDEE
D39 LSRYAGPGSHRYPVGFSGDTIISWNSLRFQPYFTATASNIGYSWWSHDIGGHMLGDYDEE
D39V LSRYAGPGSHRYPVGFSGDTIISWNSLRFQPYFTATASNIGYSWWSHDIGGHMLGDYDEE
Hungary19A-6 LSRYAGPGSHRYPVGFSGDTIISWNSLRFQPYFTATASNIGYSWWSHDIGGHMLGDYDEE
EF3030 LSRYAGPGSHRYPVGFSGDTIISWNSLRFQPYFTATASNIGYSWWSHDIGGHMLGDYDEE
************************************************************
TIGR4 LQTRWLQFGVFSPITRLHSSRSPFNSKEPWFFSETTSKIMKKYLRLRHQMIPYLYTMNVQ
D39 LQTRWLQFGVFSPITRLHSSRSPFNSKEPWFFSETTSKIMKKYLRLRHQMIPYLYTMNVK
D39V LQTRWLQFGVFSPITRLHSSRSPFNSKEPWFFSETTSKIMKKYLRLRHQMIPYLYTMNVK
Hungary19A-6 LQTRWLQFGVFSPITRLHSSRSPFNSKEPWFFSETTSKIMKKYLRLRHQMIPYLYTMNVK
EF3030 LQTRWLQFGVFSPITRLHSSRSPFNSKEPWFFSETTSKIMKKYLRLRHQMIPYLYTMNVQ
***********************************************************:
TIGR4 THEEGAPLISPIYYFYPENDESYNVPNQYFFGTELMVAPIVEKMDLTFQSAKVDVWFPEG
D39 THEEGAPLISPIYYFYPENDESYNVPNQYFFGTELMVAPIVEKMDLTFQSAKVDVWFPEG
D39V THEEGAPLISPIYYFYPENDESYNVPNQYFFGTELMVAPIVEKMDLTFQSAKVDVWFPEG
Hungary19A-6 THEEGAPLISPMYYFYPENDESYNVPNQYFFGTELMVAPIVEKMDLAFQSAKVDVWFPEG
EF3030 THEEGAPLISPIYYFYPENDESYNVPNQYFFGTELMVAPIVEKMDLTFQSAKVDVWFPEG
***********:**********************************:*************
TIGR4 EWYDFFSEKKYTGGVKLSVYRDISTTPVFAKSGAIIPLVGSEIGMGVDLPEVVDWYVFPG
D39 EWYDFFSEKKYTGGVKLSVYRDISTTPVFAKSGAIIPLVGSEIGMGVDLPEVVDWYVFPG
D39V EWYDFFSEKKYTGGVKLSVYRDISTTPVFAKSGAIIPLVGSEIGMGVDLPEVVDWYVFPG
Hungary19A-6 EWYDFFSEKKYTGGVKLSVYRDISTIPVFAKSGAIIPLVGSEIDMGVDLPEVVDWYVFPG
EF3030 EWYDFFSEKKYTGGVKLSIYRDVSNIPVFAKSGAIIPLVGSEIGMGVDLPEVVDWYVFPG
******************:***:*. *****************.****************
TIGR4 KQHSFEMLEDQNGQRYKTRLSIDWEMGMVELALQGDSSIVPSNRKHRIHFKGTNVSIIEL
D39 KQHSFEMLEDQNGQRYKTRLSIDWEMGMVELALQGDSSIVPSNRKHRIHFKGTNVSIIEL
D39V KQHSFEMLEDQNGQRYKTRLSIDWEMGMVELALQGDSSIVPSNRKHRIHFKGTNVSIIEL
Hungary19A-6 KQHSFEMLEDQNGQRYKTRLSIDWEMGMVELTLQGDSSIVPSNRRHRIHFKGTNVSIIEL
EF3030 KQHSFEMLEDQNGQRYKTRLSIDWEMGMVELALQGDSSIVPSNRKHRIHFKGTNVSIIEL
*******************************:************:***************
TIGR4 PNKNDTAKFEWKDNKRTSLNDEVFRLLKTASLPYELKDRLLNQFINAKNSHDLMNILHHQ
D39 PNKNDTAKFEWKDNKRTSLNDEVFRLLKTASLPYELKDRLLNQFINAKNSHDLMNILHHQ
D39V PNKNDTAKFEWKDNKRTSLNDEVFRLLKTASLPYELKDRLLNQFINAKNSHDLMNILHHQ
Hungary19A-6 PNKNDTARFECKDNKTISLNDEVFRLLKTASLPYELKDRLLNQFINAKNSHDLMNILHHQ
EF3030 PNKNDTAKFEWKDNKRTSLNDEVFRLLKTASLPYELKDRLLNQFINAKNSHDLMNILHHQ
*******:** **** *******************************************
TIGR4 DKELRGRLLEMIFTSQN
D39 DKELRGRLLEMIFTSQN
D39V DKELRGRLLEMIFTSQN
Hungary19A-6 DKELRGRLLEMIFTSQN
EF3030 DKELRGRLLEMIFTSQN
*****************