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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001111000
- symbol?: rpiB
- synonym:
- description?: RpiB/LacA/LacB family sugar-phosphate isomerase
- RpiB/LacA/LacB family sugar-phosphate isomerase
- putative sugar-phosphate isomerase
- ribose 5-phosphate isomerase RpiB
- galactose-6-phosphate isomerase subunit LacB
- Ribose/Galactose Isomerase
- ribose 5-phosphate isomerase, putative
- conserved domain protein
- galactose-6-phosphate isomerase LacB subunit
- predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
- Putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1296223..1296864
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKIALINENSQASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILL
D39 MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILL
D39V MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILL
Hungary19A-6 MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILL
EF3030 MKIALINENSQASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILL
*****************************.******************************
TIGR4 NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG
D39 NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG
D39V NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG
Hungary19A-6 NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG
EF3030 NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG
************************************************************
TIGR4 WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKIIDQDF
D39 WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF
D39V WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF
Hungary19A-6 WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF
EF3030 WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF
****************************************************** *****
TIGR4 LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
D39 LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
D39V LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
Hungary19A-6 LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
EF3030 LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
*********************************