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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001116000
- symbol?: PTS-EII_5
- synonym:
- description?: PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC
- PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC
- Phosphotransferase system sugar-specific EII component
- putative N-acetylgalactosamine-specific phosphotransferase system (PTS), IIC component
- N-acetylgalactosamine permease IIC component 1
- PTS system, IIC component
- PTS N-acetylgalactosamine transporter subunit IIC
- Hyaluronate-oligosaccharide-specific PTS IIC component
- Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
- PTS family sugar porter component IIC
- PTS system, hyaluronate-oligosaccharide-specific IIC component
- PTS system, N-acetylgalactosamine-specific IIC component
- PTS system N-acetylgalactosamine-specific transporter subunit IIC
- PTS system sorbose-specific iic component
- PTS system sorbose-specific iic component family protein
- PTS system sugar-specific transporter subunit EII
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1300124..1300903
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSINVFQAILIGLWTAFCFSGMLLGIYTNRCIVLSFGVGIILGDLPTALAMGAIGELAYM
D39 MSINVFQAILIGLWTAFCFSGMLLGIYTNRCIVLSFGVGIILGDLPTALAMGAIGELAYM
D39V MSINVFQAILIGLWTAFCFSGMLLGIYTNRCIVLSFGVGIILGDLPTALAMGAIGELAYM
Hungary19A-6 MSINVFQAILIGLWTAFCFSGMLLGIYTNRCIVLSFGVGIILGDLPTALAMGAIGELAYM
EF3030 MSINVFQAILIGLWTAFCFSGMLLGIYTNRCIVLSFGVGIILGDLPTALAMGAIGELAYM
************************************************************
TIGR4 GFGVGAGGTVPPNPIGPGIFGTLMAITSAGKVSPEAALALSTPIAVAIQFLQTFAYTVRA
D39 GFGVGAGGTVPPNPIGPGIFGTLMAITSAGKVSPEAALALSTPIAVAIQFLQTFAYTVRA
D39V GFGVGAGGTVPPNPIGPGIFGTLMAITSAGKVSPEAALALSTPIAVAIQFLQTFAYTVRA
Hungary19A-6 GFGVGAGGTVPPNPIGPGIFGTLMAITSAGKVSPEAALALSTPIAVAIQFLQTFAYTVRA
EF3030 GFGVGAGGTVPPNPIGPGIFGTLMAITSAGKVSPEAALALSTPIAVAIQFLQTFAYTVRA
************************************************************
TIGR4 GAPETAMKHLKNHNLKKFKFTLNATIWLFAFIGFTLGCLGALSMDTLLKLVDYIPPVLLT
D39 GAPETAMKHLKNHNLKKFKFTLNATIWLFAFIGFTLGCLGALSMDTLLKLVDYIPPVLLT
D39V GAPETAMKHLKNHNLKKFKFTLNATIWLFAFIGFTLGCLGALSMDTLLKLVDYIPPVLLT
Hungary19A-6 GAPETAMKHLKNHNLKKFKFTLNATIWLFAFIGFTLGCLGALSMDTLLKLVDYIPPVLLT
EF3030 GAPETAMKHLKNHNLKKFKFTLNATIWLFAFIGFTLGCLGALSMDTLLKLVDYIPPVLLT
************************************************************
TIGR4 GLTVAGKMLPAIGFAMILSVMAKKELIPFVLLGYVCAAYLNIPTIGIAIVGTIFALIEFY
D39 GLTVAGKMLPAIGFAMILSVMAKKELIPFVLLGYVCAAYLNIPTIGIAIVGTIFALIEFY
D39V GLTVAGKMLPAIGFAMILSVMAKKELIPFVLLGYVCAAYLNIPTIGIAIVGTIFALIEFY
Hungary19A-6 GLTVAGKMLPAIGFAMILSVMAKKELIPFVLLGYVCAAYLNIPTIGIAIVGTIFALIEFY
EF3030 GLTVAGKMLPAIGFAMILSVMAKKELIPFVLLGYVCAAYLNIPTIGIAIVGTIFALIEFY
************************************************************
TIGR4 NKPKTADHVVEEEAHDDWI
D39 NKPKTADHVVEEEAHDDWI
D39V NKPKTADHVVEEEAHDDWI
Hungary19A-6 NKPKTADHVVEEEAHDDWI
EF3030 NKPKTADHVVEEEAHDDWI
*******************