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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001249000
- symbol?: fni
- synonym:
- description?: type 2 isopentenyl-diphosphate Delta-isomerase
- type 2 isopentenyl-diphosphate Delta-isomerase
- isopentenyl-diphosphate delta-isomerase
- isopentenyl-diphosphate delta-isomerase, type 2
- isopentenyl pyrophosphate isomerase
- isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2
- Isopentenyl-diphosphate delta-isomerase, FMN-dependent
- FMN-dependent dehydrogenase family protein
- Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)
- Isopentenyl diphosphate isomerase
- L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1522884..1523894
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTTNRKDEHILYALEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINA
D39 MTTNRKDEHILYALEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINA
D39V MTTNRKDEHILYALEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINA
Hungary19A-6 MTTNRKDEHILYALEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINA
EF3030 MTTNRKDEHILYALEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINA
************************************************************
TIGR4 MTGGSNKGREINQKLAQVAESCGILFVTGSYSAALKNPTDDSFSVKSSHPNLLLGTNIGL
D39 MTGGSNKGREINQKLAQVAETCGILFVTGSYSAALKNPTDDSFSVKSSHPNLLLGTNIGL
D39V MTGGSNKGREINQKLAQVAETCGILFVTGSYSAALKNPTDDSFSVKSSHPNLLLGTNIGL
Hungary19A-6 MTGGSNKGREINQKLAQVAESCGILFVTGSYSAALKNPTDDSFSVKSSHPNLLLGTNIGL
EF3030 MTGGSNKGREINQKLAQVAESCGILFVTGSYSAALKNPTDDSFSVKSSHPNLLLGTNIGL
********************:***************************************
TIGR4 DKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSKQIPVPIVLKE
D39 DKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSKQIPVPIVLKE
D39V DKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSKQIPVPIVLKE
Hungary19A-6 DKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSEQIPVPIVLKE
EF3030 DKPVELGLQTVEEMNPVLLQVHVNVMQELLMPEGERKFRSWQSHLADYSKQIPVPIVLKE
*************************************************:**********
TIGR4 VGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRDYLNQWGQSTMQALLNAQ
D39 VGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRDYLNQWGQSTMQALLNAQ
D39V VGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRDYLNQWGQSTMQALLNAQ
Hungary19A-6 VGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRDYLNQWGQSTMQALLNAQ
EF3030 VGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQRDYLNQWGQSTMQALLNAQ
************************************************************
TIGR4 EWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKADL
D39 EWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKADL
D39V EWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKADL
Hungary19A-6 EWKDKVELLVSGGVRNPLDMIKCLVFGAKSVGLSRTVLELVETYTVEEVIGIVQGWKADL
EF3030 EWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKADL
*****************************:******************************
TIGR4 RLIMCSLNCATIADLQKVDYLLYGKLKEAKDQMKKA
D39 RLIMCSLNCATIADLQKVDYLLYGKLKEANDQMKKA
D39V RLIMCSLNCATIADLQKVDYLLYGKLKEANDQMKKA
Hungary19A-6 RLIMCSLNCATIADLQKVDYLLYGKLKEAKDQMKKA
EF3030 RLIMCSLNCATIADLQKVDYLLYGKLKEAKDQMKKA
*****************************:******