Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001252000
- symbol?: glyP
- synonym:
- description?: alanine/glycine:cation symporter family protein
- alanine/glycine:cation symporter family protein
- sodium:alanine symporter family protein
- D-alanine glycine permease
- Amino-acid carrier protein AlsT
- Na+/alanine symporter
- sodium:alanine symporter
- Sodium/glycine symporter GlyP
- amino acid carrier family protein
- amino acid carrier protein
- Sodium:alanine symporter family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1579799..1581121
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLELLKSIDAFAWGPPLLILLVGTGIYLTIRLGLLQVLRLPKAFQLIFIQDKGHGDVSSF
D39 MLELLKSIDAFTWGPPLLILLVGTGVYLTMRLGLLQVLRLPKAFQLIFIQDKGHGDVSSF
D39V MLELLKSIDAFTWGPPLLILLVGTGVYLTMRLGLLQVLRLPKAFQLIFIQDKGHGDVSSF
Hungary19A-6 MLELLKSIDAFAWGPPLLILLVGTGIYLTMRLGLLQVLRLPKAFQLIFIQDKGHGDVSSF
EF3030 MLELLKSIDAFAWGPPLLILLVGTGIYLTIRLGLLQVLRLPKAFQLIFIQDKGHGDVSSF
***********:*************:***:******************************
TIGR4 AALCTALASTVGTGNIIGVATAIKVGGPGALFWMWMAAFFGMATKYAEGLLAIKYRTKDD
D39 AALCTALASTVGTGNIIGVATAIKVGGPGALFWMWMAAFFGMATKYAEGLLAIKYRTKDD
D39V AALCTALASTVGTGNIIGVATAIKVGGPGALFWMWMAAFFGMATKYAEGLLAIKYRTKDD
Hungary19A-6 AALCTALASTVGTGNIIGVATAIKVGGPGALFWMWMAAFFGMATKYAEGLLAIKYRTKDD
EF3030 AALCTALASTVGTGNIIGVATAIKVGGPGALFWMWMAAFFGMATKYAEGLLAIKYRTKDD
************************************************************
TIGR4 HGAVAGGPMHYILLGMGEKWRPLAVLFAVAGVLVALLGIGTFTQVNSIAESIQNTTTISP
D39 HGAVAGGPMHYILLGMGEKWRPLAVLFAVAGVLVALLGIGTFTQVNSITESIQNTTTISP
D39V HGAVAGGPMHYILLGMGEKWRPLAVLFAVAGVLVALLGIGTFTQVNSITESIQNTTTISP
Hungary19A-6 HGAVAGGPMHYILLGMGEKWRPLAVLFAVAGVLVALLGIGTFTQVNSITESIQNTTTISP
EF3030 HGAVAGGPMHYILLGMGEKWRPLAVLFAVAGVLVALLGIGTFTQVNSIAESIQNTTTISP
************************************************:***********
TIGR4 AITALVLSVFVAIAVFGGLKSISKVSTTVVPFMAIIYILGTLTVIFFNIGKIPGTIALVF
D39 AITALVLSVFVAIAVFGGLKSISKVSTTVVPFMAIIYILGTLTVIFFNIGKIPGTIALVF
D39V AITALVLSVFVAIAVFGGLKSISKVSTTVVPFMAIIYILGTLTVIFFNIGKIPGTIALVF
Hungary19A-6 AITALVLSVFVAIAVFGGLKSISKVSTTVVPFMALIYILGTLTVIFFNIGKIPGTIALVF
EF3030 AITALVLSVFVAIAVFGGLKSISKVSTTVVPFMAIIYILGTLTVIFFNIGKIPGTIALVF
**********************************:*************************
TIGR4 TSAFSPLAAVGGFAGASVRMAIQNGVARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
D39 TSAFSPLAAVGGFAGASVRMAIQNGVARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
D39V TSAFSPLAAVGGFAGASVRMAIQNGVARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
Hungary19A-6 TSAFSPLAAVGGFAGASVRMAIQNGVARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
EF3030 TSAFSPLAAVGGFAGASVRMAIQNGVARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
************************************************************
TIGR4 TGTFIDTLIICTLTGLTILVTGVWSGDLNGVALTQSAFSTNFSHFGPALLTIFLVLFAFT
D39 TGTFIDTLIICTLTGLTILVTGVWSGDLNGVALTQSAFSTVFSHFGPALLTIFLVLFAFT
D39V TGTFIDTLIICTLTGLTILVTGVWSGDLNGVALTQSAFSTVFSHFGPALLTIFLVLFAFT
Hungary19A-6 TGTFIDTLIICTLTGLTILVTGVWSGDLNGVALTQSAFSTVFSHFGPALLTIFLVLFAFT
EF3030 TGTFIDTLIICTLTGLTILVTGVWSGDLNGVALTQSAFSTVFSHFGPALLTIFLVLFAFT
**************************************** *******************
TIGR4 TILGWNYYGERCFEFLFGVRFIWLYRVVFVLMVLLGGFIELDMVWIIADIVNALMALPNL
D39 TILGWNYYGERCFEFLFGVRFIWLYRVVFVLMVLLGGFIELDMVWIIADIVNALMALPNL
D39V TILGWNYYGERCFEFLFGVRFIWLYRVVFVLMVLLGGFIELDMVWIIADIVNALMALPNL
Hungary19A-6 TILGWNYYGERCFEFLFGVRFIWLYRVVFVLMVLLGGFIELDMVWIIADIVNALMALPNL
EF3030 TILGWNYYGERCFEFLFGVRFIWLYRVVFVLMVLLGGFIELDMVWIIADIVNALMALPNL
************************************************************
TIGR4 IALLVLSPVVIAETKKYFDK
D39 IALLVMSPVVIAETKKYFDK
D39V IALLVMSPVVIAETKKYFDK
Hungary19A-6 IALLVMSPVVIAETKKYFDK
EF3030 IALLVLSPVVIAETKKYFDK
*****:**************