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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001280000
- symbol?: shetA
- synonym:
- description?: TDT family transporter
- TDT family transporter
- Exfoliative toxin A
- putative C4-dicarboxylate transporter
- C4-dicarboxylate ABC transporter
- exfoliative toxin
- exfoliative toxin, putative
- C4-dicarboxylate/malic acid transport protein
- C4-dicarboxylate transporter/malic acid transport family protein
- C4-dicarboxylate transporter/malic acid transport protein
- exfoliative toxin A, putative
- putative exfoliative toxin
- Tellurite resistance protein-like permease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1561372..1562271
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKLPLVFSGCLLGLAGAGNLILDTLPVLSHLFSLIGLVLWIYFLILHLFNWKETKQELT
D39 MKKLPLVFSGCLLGLAGAGNLILDTLPVLSHLFSLTGLVLWIYFLILHLFNWKETKQELT
D39V MKKLPLVFSGCLLGLAGAGNLILDTLPVLSHLFSLTGLVLWIYFLILHLFNWKETKQELT
Hungary19A-6 MKKLPLVFSGCLLGLAGAGNLILDTLPVLSHLFSLTGLVLWIYFLILHLFNWKETKQELT
EF3030 MKKLPLVFSGCLLGLAGAGNLILDTLPVLSHLFSLTGLVLWIYFLILHLFNWKETKQELT
*********************************** ************************
TIGR4 KPPLLSGMATFPMAGMILSTYVFRVFSYLPLVAQGIWWFSFLLDLTLIAGFTIKFACPGR
D39 KPPLLSGMATFPMAGMILSTYVFRVFSYLPLVAQGIWWFSFLLDLTLIAGFTIKFACPGR
D39V KPPLLSGMATFPMAGMILSTYVFRVFSYLPLVAQGIWWFSFLLDLTLIAGFTIKFACPGR
Hungary19A-6 KPPLLSGMATFPMAGMILSTYVFRVFSYLSLVAQGIWWFSFLLDLTLIAGFTIKFACPGR
EF3030 KPPLLSGMATFPMAGMILSTYVFRVFSYLPLVAQGIWWFSFLLDLTLIAGFTIKFACPGR
*****************************.******************************
TIGR4 RVHATPSWTVLYVGIAVAALTYPLVGIIEIAYATLSFGFLLTFYLYPLIYSDLKKHPLPL
D39 RVHATPSWTVLYVGIAVAALTYPLVGIIEIAYATLSFGFLLTFYLYPLIYSDLKKHPLPL
D39V RVHATPSWTVLYVGIAVAALTYPLVGIIEIAYATLSFGFLLTFYLYPLIYSDLKKHPLPL
Hungary19A-6 RVHATPSWTVLYVGIAVAALTYPLVGIIEIAYATLSFGFLLTFYLYPLIYSDLKKHPLPL
EF3030 RVHATPSWTVLYVGIAVAALTYPLVGIIEIAYATLSFGFLLTFYLYPLIYSDLKKHPLPL
************************************************************
TIGR4 ALLGQEGIYCAPFSLLLASLVRVGGTSLPTWVLIVMILASQSFFFFVLTRLPNILKQGFQ
D39 ALLGQEGIYCAPFSLLLASLVRVGGTSLPTWVLIVMILASQSFFFFVLTRLPNILKQGFQ
D39V ALLGQEGIYCAPFSLLLASLVRVGGTSLPTWVLIVMILASQSFFFFVLTRLPNILKQGFQ
Hungary19A-6 ALLGQEGIYCAPFSLLLATLVRVGGTSLPTWVLIVMILASQSFFFFVLTRLPNILKQGFQ
EF3030 ALLGQEGIYCAPFSLLLASLVRVGGTSLPTWVLIVMILASQSFFFFVLTRLPNILKQGFQ
******************:*****************************************
TIGR4 PAFSALTFPTIITATSLKMAQGILKLPFLDYLVLAETIICLTILFFVLGAYLIWLRKKV
D39 PAFSALTFPTIITATSLKMAQGILKLPFLDYLVLTETIICLTILFFVLGAYLIWLRKKV
D39V PAFSALTFPTIITATSLKMAQGILKLPFLDYLVLTETIICLTILFFVLGAYLIWLRKKV
Hungary19A-6 PAFSALTFPTIITATSLKMAQGILKLPFLDYLVLAETIICLTILFFVLGAYLIWLRKKV
EF3030 PAFSALTFPTIITATSLKMAQGILKLPFLDYLVLAETIICLTILFFVLGAYLIWLRKKV
**********************************:************************