PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001281000
• symbol^?: gatB
• synonym:
• description^?: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB

  descriptions from strain specific annotations:

  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
  • glutamyl-tRNA amidotransferase subunit B
  • aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B)
  • aspartyl/glutamyl-tRNA amidotransferase subunit B
  • Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase
  • aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  • glutamyl tRNA-Gln amidotransferase chain B
  • aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
  • Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit
  • Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)
  • Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B
  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B
  • Bifunctional aspartyl-tRNA(Asp) amidotransferase subunit B/glutamyl-tRNA(Glu) amidotransferase subunit B
  • glutamyl-tRNA(Gln) amidotransferase, B subunit
  • glutamyl-tRNA amidotransferase
  • Glutamyl tRNA-Gln amidotransferase subunit B
  • glu-trnagln amidotransferase subunit b
• strand^?: -
• coordinates^?: 1605076..1606518
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02150 (gatB)
(2)
D39:
SPD_RS02145 (gatB)
(2)
D39V:
SPV_RS02145 (gatB)
(19A)
Hungary19A-6:
SPH_RS02640 (gatB)
(19F)
EF3030:
EF3030_RS02125 (gatB)
(6B)^?
670-6B:
SP670_RS02560 (gatB)
(6A)
6A-10:
HKM25_RS02195 (gatB)
(5)
70585:
SP70585_RS02490 (gatB)
(19F)
A026:
T308_RS02110 (gatB)
(3)
A66:
A66_RS02085 (gatB)
(11A)
AP200:
SPAP_RS02220 (gatB)
(12F)
ASP0581:
EL334_RS02325 (gatB)
(19F)
ATCC 49619:
EL263_RS02325 (gatB)
(23F)
ATCC 700669:
SPN23F_RS02090 (gatB)
(19F)
BM6001:
ODS73_RS02570 (gatB)
(1)
BVJ1JL:
JN057_RS02290 (gatB)
(14)
CGSP14:
SPCG_RS02245 (gatB)
(19F)
G54:
SPG_RS02020 (gatB)
(1)
gamPNI0373:
HMPREF1038_RS02360 (gatB)
(3)
HU-OH:
EL271_RS02070 (gatB)
(19A)
Hu15:
SPNHU15_RS02390 (gatB)
(19A)
Hu17:
SPNHU17_RS02320 (gatB)
(1)
INV104:
INV104_RS02180 (gatB)
(14)
INV200:
SPNINV200_RS02100 (gatB)
(14)
JJA:
SPJ_RS02125 (gatB)
(19F)
MDRSPN001:
MDRSPN_RS02095 (gatB)
(1)
NCTC7465:
AT689_RS00345 (gatB)
(2)
NCTC7466:
DQM66_RS02145 (gatB)
(4)
NU83127:
EL277_RS02240 (gatB)
(3)
OXC141:
SPNOXC_RS02280 (gatB)
(1)
P1031:
SPP_RS02315 (gatB)
(2)
R6:
SPR_RS02015 (gatB)
(19A)
SP49:
BMJ42_RS02790 (gatB)
(1)
SPN032672:
SPN032672_RS08435 (gatB)
(3)
SPN034156:
SPN034156_RS08195 (gatB)
(3)
SPN034183:
SPN034183_RS02290 (gatB)
(3)
SPN994038:
SPN994038_RS02215 (gatB)
(3)
SPN994039:
SPN994039_RS02210 (gatB)
(3)
SPNA45:
SPNA45_RS09070 (gatB)
(19F)
ST556:
MYY_RS02580 (gatB)
(19F)
Taiwan19F-14:
SPT_RS02370 (gatB)
(19A)
TCH8431/19A:
HMPREF0837_RS03540 (gatB)
(4)
Xen35:
CXP32_RS02200 (gatB)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MNFETVIGLEVHVELNTNSKIFSPTSAHFGNDQNANTNVIDWSFPGVLPVLNKGVVDAGI
  D39             MNFETVIGLEVHVELNTNSKIFSPTSAHFGNDQNANTNVIDWSFPGVLPVLNKGVVDAGI
  D39V            MNFETVIGLEVHVELNTNSKIFSPTSAHFGNDQNANTNVIDWSFPGVLPVLNKGVVDAGI
  Hungary19A-6    MNFETVIGLEVHVELNTNSKIFSPTSAHFGNDQNANTNVIDWSFPGVLPVLNKGVVDAGI
  EF3030          MNFETVIGLEVHVELNTNSKIFSPTSAHFGNDQNANTNVIDWSFPGVLPVLNKGVVDAGI
                  ************************************************************
  
  TIGR4           KAALALNMDIHKKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVKLEDGTTKKIGIE
  D39             KAALALNMDIHKKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVELEDGTTKKIGIE
  D39V            KAALALNMDIHKKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVELEDGTTKKIGIE
  Hungary19A-6    KAALALNMDIHKKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVELEDGTTKKIGIE
  EF3030          KAALALNMDLHKKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVELEDGTTKKIGIE
                  *********:*************************************:************
  
  TIGR4           RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYAG
  D39             RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYAG
  D39V            RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYAG
  Hungary19A-6    RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYAG
  EF3030          RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYAG
                  ************************************************************
  
  TIGR4           ISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNSFSNVRKGLEYEVQRQAEILRSG
  D39             ISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNSFSNVRKGLEYEVQRQAEILRSG
  D39V            ISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNSFSNVRKGLEYEVQRQAEILRSG
  Hungary19A-6    ISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNSFSNVRKGLEYEVQRQAEILRSG
  EF3030          ISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNSFSNVRKGLEYEVQRQAEILRSG
                  ************************************************************
  
  TIGR4           GQIRQETRRYDEANKATILMRVKEGAADYRYFPEPDLPLFEISDEWIEEMRTELPEFPKE
  D39             GQIRQETRRYDEANKATILMRVKEGAADYRYFPEPDLPLFEISDEWIEEMRTELPEFPKE
  D39V            GQIRQETRRYDEANKATILMRVKEGAADYRYFPEPDLPLFEISDEWIEEMRTELPEFPKE
  Hungary19A-6    GQIRQETRRYDEANKATILMRVKEGAADYRYFPEPDLPLFEISDEWIEEMRTELPEFPKE
  EF3030          GQIRQETRRYDEANKTTILMRVKEGAADYRYFPEPDLPLFEISDEWIEEMRTELPEFPKE
                  ***************:********************************************
  
  TIGR4           RRARYVSDLGLSDYDASQLTANKVTSDFFEKAVALGGDAKQVSNWLQGEVAQFLNAEGKT
  D39             RRARYVSDLGLSDYDASQLTANKVTSDFFEKAVALGGDAKQVSNWLQGEVAQFLNAEGKT
  D39V            RRARYVSDLGLSDYDASQLTANKVTSDFFEKAVALGGDAKQVSNWLQGEVAQFLNAEGKT
  Hungary19A-6    RRARYVSDLGLSDYDASQLTANKVTSDFFEKAVALGGDAKQVSNWLQGEVAQFLNAEGKT
  EF3030          RRARYVSDLGLSDYDASQLTANKVTSDFFEKAVALGGDAKQVSNWLQGEVAQFLNAEGKT
                  ************************************************************
  
  TIGR4           LEQIELTPENLVEMIAIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGMVQISDPAIL
  D39             LEQIELTPENLVEMIAIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGMVQISDPAIL
  D39V            LEQIELTPENLVEMIAIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGMVQISDPAIL
  Hungary19A-6    LEQIELTPENLVEMITIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGMVQISDPAIL
  EF3030          LEQIELTPENLVEMIAIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGMVQISDPAIL
                  ***************:********************************************
  
  TIGR4           IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEN
  D39             IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEN
  D39V            IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEN
  Hungary19A-6    IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEN
  EF3030          IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEN
                  ************************************************************