PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001283000
• symbol^?: gatC
• synonym:
• description^?: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC

  descriptions from strain specific annotations:

  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
  • glutamyl-tRNA(Gln) amidotransferase, C subunit
  • glutamyl-tRNA amidotransferase subunit C
  • glutamyl-tRNA(Gln) amidotransferase subunit C
  • aspartyl/glutamyl-tRNA amidotransferase subunit C
  • aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
  • Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
  • Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)
  • Aspartyl-tRNA(Asn) amidotransferase subunit C @ Glutamyl-tRNA(Gln) amidotransferase subunit C
  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C
  • Bifunctional aspartyl-tRNA(Asp) amidotransferase subunit C/glutamyl-tRNA(Glu) amidotransferase subunit C
  • glutamyl-tRNA amidotransferase
  • Glutamyl tRNA-Gln amidotransferase, subunit C
• strand^?: -
• coordinates^?: 1607984..1608286
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02160 (gatC)
(2)
D39:
SPD_RS02155 (gatC)
(2)
D39V:
SPV_RS02155 (gatC)
(19A)
Hungary19A-6:
SPH_RS02650 (gatC)
(19F)
EF3030:
EF3030_RS02135 (gatC)
(6B)^?
670-6B:
SP670_RS02570 (gatC)
(6A)
6A-10:
HKM25_RS02205 (gatC)
(5)
70585:
SP70585_RS02500 (gatC)
(19F)
A026:
T308_RS02120 (gatC)
(3)
A66:
A66_RS02095 (gatC)
(11A)
AP200:
SPAP_RS02230 (gatC)
(12F)
ASP0581:
EL334_RS02335 (gatC)
(19F)
ATCC 49619:
EL263_RS02335 (gatC)
(23F)
ATCC 700669:
SPN23F_RS02100 (gatC)
(19F)
BM6001:
ODS73_RS02580 (gatC)
(1)
BVJ1JL:
JN057_RS02300 (gatC)
(14)
CGSP14:
SPCG_RS02255 (gatC)
(19F)
G54:
SPG_RS02030 (gatC)
(1)
gamPNI0373:
HMPREF1038_RS02370 (gatC)
(3)
HU-OH:
EL271_RS02080 (gatC)
(19A)
Hu15:
SPNHU15_RS02400 (gatC)
(19A)
Hu17:
SPNHU17_RS02330 (gatC)
(1)
INV104:
INV104_RS02190 (gatC)
(14)
INV200:
SPNINV200_RS02110 (gatC)
(14)
JJA:
SPJ_RS02135 (gatC)
(19F)
MDRSPN001:
MDRSPN_RS02105 (gatC)
(1)
NCTC7465:
AT689_RS00335 (gatC)
(2)
NCTC7466:
DQM66_RS02155 (gatC)
(4)
NU83127:
EL277_RS02250 (gatC)
(3)
OXC141:
SPNOXC_RS02290 (gatC)
(1)
P1031:
SPP_RS02325 (gatC)
(2)
R6:
SPR_RS02025 (gatC)
(19A)
SP49:
BMJ42_RS02800 (gatC)
(1)
SPN032672:
SPN032672_RS08445 (gatC)
(3)
SPN034156:
SPN034156_RS08205 (gatC)
(3)
SPN034183:
SPN034183_RS02300 (gatC)
(3)
SPN994038:
SPN994038_RS02225 (gatC)
(3)
SPN994039:
SPN994039_RS02220 (gatC)
(3)
SPNA45:
SPNA45_RS09060 (gatC)
(19F)
ST556:
MYY_RS02590 (gatC)
(19F)
Taiwan19F-14:
SPT_RS02380 (gatC)
(19A)
TCH8431/19A:
HMPREF0837_RS03550 (gatC)
(4)
Xen35:
CXP32_RS02210 (gatC)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
  D39             MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
  D39V            MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
  Hungary19A-6    MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
  EF3030          MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
                  ************************************************************
  
  TIGR4           VLRPDVAEEGIDRDRLFKNVPEKDNYYIKVPAILDNGGDA
  D39             VLRPDVAEEGTDRDRLFKNVPEQDNYYIKVPAILDDGGDA
  D39V            VLRPDVAEEGTDRDRLFKNVPEQDNYYIKVPAILDDGGDA
  Hungary19A-6    VLRPDVVEEGTDRDRLFKNVPEQDNYYIKVPAILDDGGDA
  EF3030          VLRPDVAEEGTDRDRLFKNVPEKDNYYIKVPAILDDGGDA
                  ******.*** ***********:************:****