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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001328000
- symbol?: —
- synonym:
- description?: DUF2207 domain-containing protein
- DUF2207 domain-containing protein
- putative membrane protein
- conserved hypothetical protein
- threonine dehydratase
- membrane protein, putative
- Predicted membrane protein (DUF2207)
- signal peptide containing protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1604801..1606690
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI
D39 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI
D39V MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI
Hungary19A-6 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI
EF3030 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI
************************************************************
TIGR4 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV
D39 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV
D39V VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV
Hungary19A-6 VGLGRAGKMPSGFDIDPHPKIQAAKNGAEPADVTSEVTEEADGYTVRVYNPGQEGDIVEV
EF3030 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV
********************:******** ******************************
TIGR4 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI
D39 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV
D39V DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV
Hungary19A-6 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV
EF3030 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI
********************************************************* *:
TIGR4 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVREKDQ
D39 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ
D39V EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ
Hungary19A-6 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKEQ
EF3030 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVREKDQ
*******************************************************:**:*
TIGR4 SKQLVTWVLPSILSISLLLSVCFYFIYRRKTTPSVKYAKNHRLYEPPMELEPMVLSEAVY
D39 SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVY
D39V SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVY
Hungary19A-6 SKQLLTWIFPSILSISLLLSVCFYFIYRRKTTPSVKYAKNHRLYEPPMELEPMVLSEAVY
EF3030 SKQLVTWVLPSILSISLLLSVCFYFIYRRKTTPSVKYAKNHRLYEPPMELEPMVLSEAVY
****:**::***********:**********:**:*************************
TIGR4 STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK
D39 STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK
D39V STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK
Hungary19A-6 STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK
EF3030 STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK
************************************************************
TIGR4 DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE
D39 DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE
D39V DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE
Hungary19A-6 DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGIQLKSSFEAVLKEMQE
EF3030 DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE
********************************************:******* **::***
TIGR4 GVRKRVSFWGLPDYYRPLTGGEKALQVGMGALTILPLFIGFGLFLYSLDVHGYLYLPLPI
D39 GVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI
D39V GVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI
Hungary19A-6 GVRKRVVFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI
EF3030 GVRKRVSFWGLPDYYRPLTGGEKALQVGMGALTILPLFIGFGLFLYSLDVHGYLYLPLPI
****** ************* *********.*****************************
TIGR4 LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDQAELESIVVW
D39 LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVW
D39V LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVW
Hungary19A-6 LGFLGLVLSVFYYWKLQLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDQAELESIVVW
EF3030 LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDQAELESIVVW
****************:*********************************:*********
TIGR4 NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSTFYHSTAQMSHYASVANT
D39 NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANT
D39V NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANT
Hungary19A-6 NRLLVYATLFGYADKVSHLMKVHQIQVENPDINFYVAYGWHSMFYHSTAQMSHYASVANT
EF3030 NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSMFYHSTAQMSHYASVANT
*********************************:******** ****:************
TIGR4 ASTYSVSSGSGSSGGGFSGGGGGGSIGAF
D39 ASTYSVSSGSGSSGGGFSGGGGGGSIGAF
D39V ASTYSVSSGSGSSGGGFSGGGGGGSIGAF
Hungary19A-6 ASTYSVSSGSGSSGGGFSGGGGGGSIGAF
EF3030 ASTYSVSSGSGSSGGGFSGGGGGGSIGAF
*****************************