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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001353000
- symbol?: xylR
- synonym:
- description?: ROK family transcriptional regulator
- ROK family transcriptional regulator
- ROK family protein
- MarR family transcriptional regulator
- N-acetylglucosamine repressor
- Xylose repressor protein
- putative regulator
- ROK family regulator
- Transcriptional regulator/sugar kinase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1650119..1651342
- occurrence?: in 66% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MITKQSAFLQNRATILEFLYRNPATSRTDIVNETGLTPATTTNIIKELSEQSLIYETGDE
D39 MITKQSAFLQNRATILEFLYRNPATSRTDIVNETGLTPATTTNIIKELSEQSLIYETGDE
D39V MITKQSAFLQNRATILEFLYRNPATSRTDIVNETGLTPATTTNIIKELSEQSLIYETGDE
Hungary19A-6 MITKQSAFLQNRATILEFLYRNPATSRTDIVNETGLTPATTTNIIKELSEQSLIYETGDE
************************************************************
TIGR4 FSEFSGSGRRRKTISITDNIPYVVGGIEINVLGIFLSLCDLQGKTLFETEILNEDYPISE
D39 FSEFSGSGRRRKTISITDNIPYVVGGIEINVLGIFLSLCDLQGKTLFETEILNEDYPISE
D39V FSEFSGSGRRRKTISITDNIPYVVGGIEINVLGIFLSLCDLQGKTLFETEILNEDYPISE
Hungary19A-6 FSEFSGSGRRRKTISITDNIPYVVGGIEINVLGIFLSLCDLQGKTLFETEILNEDYPISE
************************************************************
TIGR4 INSTITNMIKTAIEYVPLETKLLGFGLSIPGHYNKDSGSIITNNPIWESFNLLNVIKRFN
D39 INSTITNMIKTAIEYVPLETKLLGFGLSIPGHYNKDSGSIITNNPIWESFNLLNVIKDFN
D39V INSTITNMIKTAIEYVPLETKLLGFGLSIPGHYNKDSGSIITNNPIWESFNLLNVIKDFN
Hungary19A-6 INSTITNMIKTAIEYVPLETKLLGFGLSIPGHYNKDSGSIITNNPIWESFNLLNVIKRFN
********************************************************* **
TIGR4 FPFIVKNNIDCMAIGQYLFNPHNTPDNFIFLHAGLGIYTSFFTKEKIGASKNPYIGEIGH
D39 FPFIVKNNIDCMAIGQYLFNPHNTPDNFIFLHAGLGIYTSFFTKEKIGASKNPYIGEIGH
D39V FPFIVKNNIDCMAIGQYLFNPHNTPDNFIFLHAGLGIYTSFFTKEKIGASKNPYIGEIGH
Hungary19A-6 FPFIVKNNIDCMAIGQYLFNPHNTPDNFIFLHAGLGIYTSFFTKEKIGASKNPYIGEIGH
************************************************************
TIGR4 TIVELNGQYCECGKKGCLQTYISDAWLIKHAQLLFKNSQLTVLKSLVKTEKDIHLDTLLT
D39 TIVELNGQYCECGKKGCLQTYISDAWLIKHAQLLFKNSQLTVLKSLVKTEKDIHLDTLLT
D39V TIVELNGQYCECGKKGCLQTYISDAWLIKHAQLLFKNSQLTVLKSLVKTEKDIHLDTLLT
Hungary19A-6 TIVELNGQYCECGKKGCLQTYISDAWLIKHAQLLFKNSQLTVLKSLVKTEKDIHLDTLLT
************************************************************
TIGR4 AYNLGDSALRQQIDKGVNLLATSIANLLLINPADKIYINSQLLNYQPFTHEVRDKIQDQL
D39 AYNLGDSALRQQIDKGVNLLATSIANLLLINPADKIYINSQLLNYQPFTHEVRDKIQDQL
D39V AYNLGDSALRQQIDKGVNLLATSIANLLLINPADKIYINSQLLNYQPFTHEVRDKIQDQL
Hungary19A-6 AYNLGDSALRQQIDKGVNLLATSIANLLLINPADKIYINSQLLNYQPFTHEVRDKIQDQL
************************************************************
TIGR4 HFVPFTRNIEIEILPYNKHRGSIGACALAIVAFFIEHSNVLQDIISP
D39 HFVPFTRNIEIEILPYNKHRGSIGACALAIVAFFIEHSNVLQDIISP
D39V HFVPFTRNIEIEILPYNKHRGSIGACALAIVAFFIEHSNVLQDIISP
Hungary19A-6 HFVPFTRNIEIEILPYNKHRGSIGACALAIVAFFIEHSNVLQDIISP
***********************************************