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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001366000
- symbol?: mtsC
- synonym:
- description?: energy-coupling factor transporter transmembrane protein EcfT
- energy-coupling factor transporter transmembrane protein EcfT
- cobalt transport family protein
- putative transport protein
- cobalt ABC transporter permease
- cobalt transport protein
- Energy-coupling factor transporter transmembrane
- ABC transporter permease
- Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
- ABC transporter membrane-spanning permease - unknown substrate
- ABC-type cobalt transport system, permease component CbiQ-like transporter
- membrane protein, putative
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1666014..1666844
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MQAKLIGYQHRDTVIHRLSGAGKLLFFILVSLAAMISYDTRMLLLIAIFSVFLLYLSEIR
D39 MQAKLIGYQHRDTVIHRLSGAGKLLFFILVSLAAMISYDTRLLVLIAIFSVFLLYLSEIH
D39V MQAKLIGYQHRDTVIHRLSGAGKLLFFILVSLAAMISYDTRLLVLIAIFSVFLLYLSEIH
Hungary19A-6 MQAKLIGYQHRDTVIHRLSGAGKLLFFILVSLAAMISYDTRMLLLIAIFSVFLLYLSEIR
EF3030 MQAKLIGYQHRDTVIHRLSGAGKLLFFILVSLAAMISYDTRMLLLIAIFSVFLLYLSEIR
*****************************************:*:***************:
TIGR4 FKDVSFVAVFATIFAVLNVLMVYLFSPEYGVGLYGERSVIWQGIGVYTLTSQELFYLLNL
D39 FKDVSFVAVFATVFAVLNVLMVYLFSPEYGVGLYGERSVIWQGIGAYTLTSQELFYLLNL
D39V FKDVSFVAVFATVFAVLNVLMVYLFSPEYGVGLYGERSVIWQGIGAYTLTSQELFYLLNL
Hungary19A-6 FKDVSFVAVFATVFAVLNVLMVYLFSPEYGVGLYGERSVIWQGIGVYTLTSQELFYLLNL
EF3030 FKDVSFVAVFATVFAVLNVLMVYLFSPEYGVGLYGERSVIWQGIGVYTLTSQELFYLLNL
************:********************************.**************
TIGR4 AIKYLCTIPLAIIFLMTTHPSQFASSLNQIGVPYKIAYSVSLTLRYIPDLQEEFFTIKMS
D39 AIKYLCTIPLAIIFLMTTHPSQFASSLNQIGVPYKIAYSVSLTLRYIPDLQEEFFTIKMS
D39V AIKYLCTIPLAIIFLMTTHPSQFASSLNQIGVPYKIAYSVSLTLRYIPDLQEEFFTIKMS
Hungary19A-6 AIKYLCTIPLAIIFLMTTHPSQFASSLNQIGVPYKIAYSVSLTLRYIPDLQEEFFTIKMS
EF3030 AIKYLCTIPLAIIFLMTTHPSQFASSLNQIGVPYKIAYSVSLTLRYIPDLQEEFFTIKMS
************************************************************
TIGR4 QEARGMELSKKASLMQRIKGNLLIITPLIFSSLERIDTIATAMELRRFGKEKKRTWYSYQ
D39 QEARGMELSKKASLMQRIKGNLLIITPLIFSSLERIDTIATAMELRRFGKEKKRTWYSYQ
D39V QEARGMELSKKASLMQRIKGNLLIITPLIFSSLERIDTIATAMELRRFGKEKKRTWYSYQ
Hungary19A-6 QEARGMELSKKASLMQRIKGNLLIITPLIFSSLERIDTIATAMELRRFGKEKKRTWYSYQ
EF3030 QEARGMELSKKASLMQRIKGNLLIITPLIFSSLERIDTIATAMELRRFGKEKKRTWYSYQ
************************************************************
TIGR4 ALKKGDYITLLLATLFLVVSLLLILQNQGRFYNPWK
D39 ALKKGDYITLLLATLFLVVSLLLILQNQGRFYNPWK
D39V ALKKGDYITLLLATLFLVVSLLLILQNQGRFYNPWK
Hungary19A-6 ALKKGDYITFLLATLFLVASLLLILQNQGRFYNPWK
EF3030 ALKKGDYITLLLATLFLVVSLLLILQNQGRFYNPWK
*********:********.*****************