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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001390000
- symbol?: ecsB
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- ABC transporter, permease protein
- ABC transporter protein EcsB
- multidrug ABC transporter permease
- ABC transporter, permease protein, putative
- ABC transporter, permease protein EscB
- ABC transporter membrane-spanning permease - unknown substrate
- ABC transporter permease protein EcsB
- bacterial ABC transporter EcsB family protein
- bacterial ABC transporter protein EcsB
- Predicted ABC-type exoprotein transport system, permease component
- putative ABC transporter, permease protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1783463..1784512
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLF
D39 MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLF
D39V MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLF
Hungary19A-6 MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLF
EF3030 MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLF
************************************************************
TIGR4 VGITSVLLLLWGGTATYMEAPDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFA
D39 VGITSVLLLLWGGIATYMEAPDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFA
D39V VGITSVLLLLWGGIATYMEAPDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFA
Hungary19A-6 VGITSVLLLLWGGIATYMEAPDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFA
EF3030 VGITSVLLLLWGGIATYMEAPDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFA
************* **********************************************
TIGR4 PLFLAMGYGLPVFLLYVLLLGVGKYFHFCQKASKFFTETGLDWDYVISQESKRKQVLLRF
D39 PLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETGLDWDYVISQESKRKQVLLRF
D39V PLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETGLDWDYVISQESKRKQVLLRF
Hungary19A-6 PLFLAMGYGLPVFLLYVLLLGVGKYFHFCQKASKFFTETGLDWDYLISQESKRKQVLLRF
EF3030 PLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETGLDWDYVISQESKRKQVLLRF
**************************** ****************:**************
TIGR4 FALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
D39 FALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFAISLRLLLLS
D39V FALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFAISLRLLLLS
Hungary19A-6 FALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
EF3030 FALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
***************************************************:********
TIGR4 LLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVR
D39 VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVR
D39V VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVR
Hungary19A-6 VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVR
EF3030 VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVR
:***********************************************************
TIGR4 GLTSFVLLVELVVGLITFQEKLALLALLGAGLVLLVLYLPYQVKRQMQD
D39 GLTSFVLLVELVVGLITFQEKLALLALLGAGLVLLVLYLPYQVKRQMQD
D39V GLTSFVLLVELVVGLITFQEKLALLALLGAGLVLLVLYLPYQVKRQMQD
Hungary19A-6 GLTSFVLLVELVVGLITFQEKLALLALLGAGLVLLVLYLPYQVKRQMQD
EF3030 GLTSFVLLVELVVGLITFQEKLALLALLGAGLVLLVLYLPYQVKRQMQD
*************************************************