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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001408000
- symbol?: dnaJ
- synonym:
- description?: molecular chaperone DnaJ
- molecular chaperone DnaJ
- chaperone protein DnaJ
- dnaJ protein
- dnaJ protein, Heat-shock protein (activation of DnaK)
- chaperone DnaJ
- DnaJ-class molecular chaperone with C-terminal Zn finger domain
- Heat-shock protein (activation of DnaK)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1747854..1748992
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS08540 (dnaJ)
SPN034183:
SPN034183_RS02615 (dnaJ)
SPN994038:
SPN994038_RS02535 (dnaJ)
⊟Genome Viewer[edit | edit source]
TIGR4 | |
D39 | |
D39V | |
Hungary19A-6 | |
EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNNTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQ
D39 MNNTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQ
D39V MNNTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQ
Hungary19A-6 MNNTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQ
EF3030 MNNTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKDPGAEDKYKEVQEAYETLSDDQ
**************************************:*********************
TIGR4 KRAAYDQYGAAGANGGFGGAGGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPRQGDD
D39 KRAAYDQYGAAGAN------GGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPRQGDD
D39V KRAAYDQYGAAGAN------GGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPRQGDD
Hungary19A-6 KRAAYDQYGAAGANGGFGGDGGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPRQGDD
EF3030 KRAAYDQYGAAGTNGGFGGAGGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPRQGDD
************:* ****************************************
TIGR4 LQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVDTQT
D39 LQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVDTQT
D39V LQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVDTQT
Hungary19A-6 LQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVDTQT
EF3030 LQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVDTQT
************************************************************
TIGR4 PLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLAGQG
D39 PLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLAGQG
D39V PLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLAGQG
Hungary19A-6 PLGMMRRQVTCDVCHGQGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLAGQG
EF3030 PLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKVPAGVETGQQIRLAGQG
****************:**************************:****************
TIGR4 EAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDVELV
D39 EAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDVELV
D39V EAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDVELV
Hungary19A-6 EAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDVELV
EF3030 EAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDVELV
************************************************************
TIGR4 IPEGTQTGKKFRLRSKGAPSLRGGAVGDQYVTVNVVTPTGLNDRQKVALKEFAAAGDLKV
D39 IPEGTQTGKKFRLRSKGAPSLRGGAVGDQYVTVNVVTPTGLNDRQKVALKEFAAAGDLKV
D39V IPEGTQTGKKFRLRSKGAPSLRGGAVGDQYVTVNVVTPTGLNDRQKVALKEFAAAGDLKV
Hungary19A-6 IPEGTQTGKKFRLRSKGAPSLRGGAVGDQYVTVNVVTPTGLNDRQKVALKEFAAAGDLKV
EF3030 IPEGTQTGKKFRLRGKGAPSLRGGAVGDQYVTVNVVTPTGLNDRQKVALKEFAAAGDLKV
**************.*********************************************
TIGR4 NPKKKGFFDHIKDAFDGE
D39 NPKKKGFFDHIKDAFDGE
D39V NPKKKGFFDHIKDAFDGE
Hungary19A-6 NPKKKGFFDHIKDAFDGE
EF3030 NPKKKGFFDHIKDAFDGE
******************