PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001434000
• symbol^?: infB
• synonym:
• description^?: translation initiation factor IF-2

  descriptions from strain specific annotations:

  • translation initiation factor IF-2
  • translation initiation factor 2
  • Initiation factor IF2
• strand^?: +
• coordinates^?: 1827173..1830062
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02730 (infB)
(2)
D39:
SPD_RS02600 (infB)
(2)
D39V:
SPV_RS02595 (infB)
(19A)
Hungary19A-6:
SPH_RS03175 (infB)
(19F)
EF3030:
EF3030_RS02635 (infB)
(6B)^?
670-6B:
SP670_RS03090 (infB)
(6A)
6A-10:
HKM25_RS02675 (infB)
(5)
70585:
SP70585_RS03020 (infB)
(19F)
A026:
T308_RS02665 (infB)
(3)
A66:
A66_RS02510 (infB)
(11A)
AP200:
SPAP_RS02715 (infB)
(12F)
ASP0581:
EL334_RS02840 (infB)
(19F)
ATCC 49619:
EL263_RS02775 (infB)
(23F)
ATCC 700669:
SPN23F_RS02570 (infB)
(19F)
BM6001:
ODS73_RS03070 (infB)
(1)
BVJ1JL:
JN057_RS02770 (infB)
(14)
CGSP14:
SPCG_RS02740 (infB)
(19F)
G54:
SPG_RS02540 (infB)
(1)
gamPNI0373:
HMPREF1038_RS02855 (infB)
(3)
HU-OH:
EL271_RS02560 (infB)
(19A)
Hu15:
SPNHU15_RS02880 (infB)
(19A)
Hu17:
SPNHU17_RS02810 (infB)
(1)
INV104:
INV104_RS02710 (infB)
(14)
INV200:
SPNINV200_RS02610 (infB)
(14)
JJA:
SPJ_RS02600 (infB)
(19F)
MDRSPN001:
MDRSPN_RS07790 (infB)
(1)
NCTC7465:
AT689_RS10940 (infB)
(2)
NCTC7466:
DQM66_RS02600 (infB)
(4)
NU83127:
EL277_RS02805 (infB)
(3)
OXC141:
SPNOXC_RS02740 (infB)
(1)
P1031:
SPP_RS02810 (infB)
(2)
R6:
SPR_RS02450 (infB)
(19A)
SP49:
BMJ42_RS03310 (infB)
(1)
SPN032672:
SPN032672_RS08975 (infB)
(3)
SPN034156:
SPN034156_RS08665 (infB)
(3)
SPN034183:
SPN034183_RS02755 (infB)
(3)
SPN994038:
SPN994038_RS02675 (infB)
(3)
SPN994039:
SPN994039_RS02675 (infB)
(3)
SPNA45:
SPNA45_RS08660 (infB)
(19F)
ST556:
MYY_RS03145 (infB)
(19F)
Taiwan19F-14:
SPT_RS02920 (infB)
(19A)
TCH8431/19A:
HMPREF0837_RS04090 (infB)
(4)
Xen35:
CXP32_RS02800 (infB)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEA
  D39             MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEA
  D39V            MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEA
  Hungary19A-6    MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEA
  EF3030          MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEA
                  ************************************************************
  
  TIGR4           KPAAPKVSAEKKAEKSEPAKPAVAKEEAKPAAPKASAEKKAEKSEPVKPAVAKEEAKPAE
  D39             KPAAPKVSAEKKTEKSEPA----------------------------KPAVAKEEAKPAE
  D39V            KPAAPKVSAEKKTEKSEPA----------------------------KPAVAKEEAKPAE
  Hungary19A-6    KPAAPKVSAEKKTEKSEPA----------------------------KPAVAKEEAKPAE
  EF3030          KPAAPKVSAEKKAEKSEPA----------------------------KPAVAKEEAKPAE
                  ************:******                            *************
  
  TIGR4           PVTPKTEKVAAKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQ
  D39             PVAPKTEKVAAKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQ
  D39V            PVAPKTEKVAAKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQ
  Hungary19A-6    PVAPKTEKVAAKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQ
  EF3030          PVAPKTEKVAAKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQ
                  **:*********************************************************
  
  TIGR4           GQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQAAPRIDFKARAAALKAEQNAEYA
  D39             GQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQAAPRIDFKARAAALKAEQNAEYA
  D39V            GQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQAAPRIDFKARAAALKAEQNAEYA
  Hungary19A-6    GQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQAAPRIDFKARAAALKAEQNAEYA
  EF3030          GQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQVAPRIDFKARAAALKAEQNAEYA
                  *************************************.**********************
  
  TIGR4           RSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDT
  D39             RSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDT
  D39V            RSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDT
  Hungary19A-6    RSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDT
  EF3030          RSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDT
                  ************************************************************
  
  TIGR4           RRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQ
  D39             RRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQ
  D39V            RRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQ
  Hungary19A-6    RRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQ
  EF3030          RRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQ
                  ************************************************************
  
  TIGR4           TPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGET
  D39             TPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGET
  D39V            TPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGET
  Hungary19A-6    TPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGET
  EF3030          TPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGET
                  ************************************************************
  
  TIGR4           IELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLD
  D39             IELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLD
  D39V            IELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLD
  Hungary19A-6    IELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLD
  EF3030          IELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLD
                  ************************************************************
  
  TIGR4           TLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVV
  D39             TLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVV
  D39V            TLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVV
  Hungary19A-6    TLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVV
  EF3030          TLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVV
                  ************************************************************
  
  TIGR4           AADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSE
  D39             AADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSE
  D39V            AADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSE
  Hungary19A-6    AADDGVMPQTIEAINHSKAVNVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSE
  EF3030          AADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGTNPERVIGELAEHGVMSTAWGGDSE
                  *******************.***************:************************
  
  TIGR4           FVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQG
  D39             FVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQG
  D39V            FVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQG
  Hungary19A-6    FVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQG
  EF3030          FVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQG
                  ************************************************************
  
  TIGR4           TLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKS
  D39             TLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKS
  D39V            TLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKS
  Hungary19A-6    TLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKS
  EF3030          TLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKS
                  ************************************************************
  
  TIGR4           ARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQ
  D39             ARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQ
  D39V            ARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQ
  Hungary19A-6    ARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQ
  EF3030          ARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQ
                  ************************************************************
  
  TIGR4           KIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHS
  D39             KIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHS
  D39V            KIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHS
  Hungary19A-6    KIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHS
  EF3030          KIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHS
                  ************************************************************
  
  TIGR4           IIYKVIEEMEEAMKGMLDPEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVR
  D39             IIYKVIEEMEEAMKGMLDPEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVR
  D39V            IIYKVIEEMEEAMKGMLDPEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVR
  Hungary19A-6    IIYKVIEEMEEAMKGMLDPEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVR
  EF3030          IIYKVIEEMEEAMKGMLDPEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVR
                  ************************************************************
  
  TIGR4           VIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR
  D39             VIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR
  D39V            VIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR
  Hungary19A-6    VIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR
  EF3030          VIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR
                  **********************************************************