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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001474000
- symbol?: —
- synonym:
- description?: endonuclease/exonuclease/phosphatase family protein
- endonuclease/exonuclease/phosphatase family protein
- endonuclease/exonuclease/phosphatase family
- putative integral membrane protein (possible nuclease activity)
- endonuclease
- conserved hypothetical protein
- Putative integral membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1891080..1894122
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIKTFLSALSVILFSIPIITYSFFPSSNLNIWLSTQPILAQIYAFPLATATMAAILSFLF
D39 MIKTFLSALSVILFVIPIITYSFFPSSNLNIWLSTRPILAQIYAFPLATATMAAILSFVF
D39V MIKTFLSALSVILFVIPIITYSFFPSSNLNIWLSTRPILAQIYAFPLATATMAAILSFVF
Hungary19A-6 MIKTFLSALSVILFSIPIITYSFFPSSNLNIWLSTQPILAQIYAFPLATATMAAILSFLF
EF3030 MIKTFLSALSVILFSIPIITYSFFPSSNLNIWLSTQPILAQIYAFPLATATMAAILSFLF
************** ********************:**********************:*
TIGR4 FFLSFYKKNKQIRFYSGILLLLSLILLLFGTDKTLSSASNKTKTLKLVTWNVANQIEAQH
D39 FSLSFYKKNKQIRFYSGILLLLSLILLLFGTDKTLSSASNKTKTLKLVTWNVANQIEAQH
D39V FSLSFYKKNKQIRFYSGILLLLSLILLLFGTDKTLSSASNKTKTLKLVTWNVANQIEAQH
Hungary19A-6 FFLSFYKKNKQIRFYSGILLLLSLILLLFGTDKILSSASNKTKTLKLVTWNVANQIEAQH
EF3030 FFLSFYKKNKQIRFYSGILLLLSLILLLFGTDKTLSSASNKTKTLKLVTWNVANQIEAQH
* ******************************* **************************
TIGR4 IERIFSHFDADMAIFPELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPV
D39 IERIFSHFDADMAIFPELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPV
D39V IERIFSHFDADMAIFPELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPV
Hungary19A-6 IERIFSHFDADMAIFPELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPV
EF3030 IERIFSHFDADMAIFPELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPV
************************************************************
TIGR4 TVIVKKSYGFYTEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPGLMEIWKQDLNII
D39 TVIVKKSYGFYTEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPGLMEIWKQDLNII
D39V TVIVKKSYGFYTEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPGLMEIWKQDLNII
Hungary19A-6 TVIVKKSYGFYTEAETFHTTRFGTIVLHSRKQDIPDIIALHTAPPLPGLMEIWKQDLNII
EF3030 TVIVKKSYGFYTEAETFHTTRFGTIVLHSRKQDIPDIIALHTAPPLPGLMEIWKQDLNII
**************:*****************:***************************
TIGR4 HNQLASKYPKAIIAGDFNATMRHGALAKISSHRDALNALPPFERGTWNSQSPKLFNATID
D39 HNQLASKYPKAIIAGDFNATMRHGALAKISSHRDALNVLPPFERGTWNSQSPKLFNATID
D39V HNQLASKYPKAIIAGDFNATMRHGALAKISSHRDALNVLPPFERGTWNSQSPKLFNATID
Hungary19A-6 HNQLASKYPKAIIAGDFNATMRHGALAKISSHRDALNALPPFERGTWNSQSPKLFNATID
EF3030 HNQLASKYPKAIIAGDFNATMRHGALAKISSHRDALNALPPFERGTWNSQSPKLFNATID
*************************************.**********************
TIGR4 HILLPKNHYYVKDLDIVSFQNSDHRCIFTEITF
D39 HILLPKNHYYVKDLDIVSFQNSDHRCIFTEITF
D39V HILLPKNHYYVKDLDIVSFQNSDHRCIFTEITF
Hungary19A-6 HILLPKNHYYVKDLDIVSFQNSDHRCIFTEITF
EF3030 HILLPKNHYYVKDLDIVSFQNSDHRCIFTEITF
*********************************