PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001491000
• symbol^?: —
• synonym:
• description^?: conserved hypothetical protein

  descriptions from strain specific annotations:

  • conserved hypothetical protein
  • hyperosmolarity resistance protein Ebh
  • putative uncharacterized protein
  • putative uncharacterized protein (pseudogene)
  • Uncharacterised protein
  • pseudogene
• strand^?: +
• coordinates^?: 1911334..1911695
• occurrence^?: in 60% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02940
(2)
D39:
SPD_RS02790
(2)
D39V:
SPV_RS02785
(19A)
Hungary19A-6:
—
(19F)
EF3030:
—
(6B)^?
670-6B:
—
(6A)
6A-10:
HKM25_RS02860
(5)
70585:
SP70585_RS03245
(19F)
A026:
T308_RS02855
(3)
A66:
A66_RS02710
(11A)
AP200:
SPAP_RS02905
(12F)
ASP0581:
—
(19F)
ATCC 49619:
EL263_RS02965
(23F)
ATCC 700669:
SPN23F_RS02755
(19F)
BM6001:
ODS73_RS03245
(1)
BVJ1JL:
—
(14)
CGSP14:
—
(19F)
G54:
—
(1)
gamPNI0373:
HMPREF1038_RS03060
(3)
HU-OH:
—
(19A)
Hu15:
—
(19A)
Hu17:
—
(1)
INV104:
INV104_RS02920
(14)
INV200:
—
(14)
JJA:
SPJ_RS02760
(19F)
MDRSPN001:
MDRSPN_RS07600
(1)
NCTC7465:
AT689_RS13755
(2)
NCTC7466:
DQM66_RS02790
(4)
NU83127:
EL277_RS03010
(3)
OXC141:
—
(1)
P1031:
—
(2)
R6:
SPR_RS02645
(19A)
SP49:
BMJ42_RS03500
(1)
SPN032672:
SPN032672_RS09190
(3)
SPN034156:
—
(3)
SPN034183:
—
(3)
SPN994038:
—
(3)
SPN994039:
—
(3)
SPNA45:
SPNA45_RS08440
(19F)
ST556:
MYY_RS03330
(19F)
Taiwan19F-14:
SPT_RS03110
(19A)
TCH8431/19A:
HMPREF0837_RS04280
(4)
Xen35:
CXP32_RS03000

⊟Genome Viewer

TIGR4
D39
D39V

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MQILCYFTITVVAKPNNSGEVHLDVSIEDNQGGSGYNFSSVSSSSQTAKYEGTVYNNNSS
  D39             MQILCYFTITVVAKPNNSGEVHLDVSIEDNQGGSGHNFSSVSSSSQTAKYEETGYNNNSS
  D39V            MQILCYFTITVVAKPNNSGEVHLDVSIEDNQGGSGHNFSSVSSSSQTAKYEETGYNNNSS
                  ***********************************:*************** * ******
  
  TIGR4           LYITIDKTSDATALLKLKLNNVDNQPATEVPSSGITVKLNAKDNAGNWTSASNKKEVTVK
  D39             LYITIDKTSDATALLKLKLNNVDNQPATEVPSSGITVKLNAKDNAGNWTSASNKKEVTVK
  D39V            LYITIDKTSDATALLKLKLNNVDNQPATEVPSSGITVKLNAKDNAGNWTSASNKKEVTVK
                  ************************************************************
  
  TIGR4           IVSAKPTYPDKILVKNPDNIKDTEKMPLLKN
  D39             IVSAKPTYPDKILVKNPDNIKDTEKMPLLKN
  D39V            IVSAKPTYPDKILVKNPDNIKDTEKMPLLKN
                  *******************************