PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001499000
• symbol^?: vncS
• synonym:
• description^?: sensor histidine kinase VncS

  descriptions from strain specific annotations:

  • sensor histidine kinase VncS
  • two-component system, sensor histidine kinase
  • VncS, histidine kinase
  • VncS histidine kinase TCS10
  • Heme sensor protein HssS
  • histidine kinase
  • two-component sensor histidine kinase
  • HAMP domain-containing histidine kinase
  • HAMP domain protein
  • his Kinase A domain protein
  • sensor histidine kinase
  • Signal transduction histidine kinase
  • Two-component system sensor histidine kinase VncS
• strand^?: +
• coordinates^?: 1916968..1918296
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02970 (vncS)
(2)
D39:
SPD_RS02815 (vncS)
(2)
D39V:
SPV_RS02810 (vncS)
(19A)
Hungary19A-6:
SPH_RS03395 (vncS)
(19F)
EF3030:
EF3030_RS02845 (vncS)
(6B)^?
670-6B:
SP670_RS03315 (vncS)
(6A)
6A-10:
HKM25_RS02890 (vncS)
(5)
70585:
SP70585_RS03275 (vncS)
(19F)
A026:
T308_RS02885 (vncS)
(3)
A66:
A66_RS02740 (vncS)
(11A)
AP200:
SPAP_RS02935 (vncS)
(12F)
ASP0581:
EL334_RS03050 (vncS)
(19F)
ATCC 49619:
EL263_RS02990 (vncS)
(23F)
ATCC 700669:
SPN23F_RS02785 (vncS)
(19F)
BM6001:
ODS73_RS03280 (vncS)
(1)
BVJ1JL:
JN057_RS02980 (vncS)
(14)
CGSP14:
SPCG_RS02980 (vncS)
(19F)
G54:
SPG_RS02765 (vncS)
(1)
gamPNI0373:
HMPREF1038_RS03090 (vncS)
(3)
HU-OH:
EL271_RS02770 (vncS)
(19A)
Hu15:
SPNHU15_RS03075 (vncS)
(19A)
Hu17:
SPNHU17_RS03005 (vncS)
(1)
INV104:
INV104_RS02955 (vncS)
(14)
INV200:
SPNINV200_RS02850 (vncS)
(14)
JJA:
SPJ_RS02790 (vncS)
(19F)
MDRSPN001:
MDRSPN_RS07575 (vncS)
(1)
NCTC7465:
AT689_RS10715 (vncS)
(2)
NCTC7466:
DQM66_RS02815 (vncS)
(4)
NU83127:
EL277_RS03035 (vncS)
(3)
OXC141:
SPNOXC_RS02970 (vncS)
(1)
P1031:
SPP_RS03050 (vncS)
(2)
R6:
SPR_RS02680 (vncS)
(19A)
SP49:
BMJ42_RS03530 (vncS)
(1)
SPN032672:
SPN032672_RS09225 (vncS)
(3)
SPN034156:
SPN034156_RS08895 (vncS)
(3)
SPN034183:
SPN034183_RS02985 (vncS)
(3)
SPN994038:
SPN994038_RS02905 (vncS)
(3)
SPN994039:
SPN994039_RS02905 (vncS)
(3)
SPNA45:
SPNA45_RS08410 (vncS)
(19F)
ST556:
MYY_RS03360 (vncS)
(19F)
Taiwan19F-14:
SPT_RS03140 (vncS)
(19A)
TCH8431/19A:
HMPREF0837_RS04310 (vncS)
(4)
Xen35:
CXP32_RS03025 (vncS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKRTGLFAKIFIYTFSIFSVLVICLHLAIYFLFPSTYLSHRQETIGQKATAIAQSLEGKD
  D39             MKRTGLFAKIFIYTFSIFSVLVICLHLAIYFLFPSTYLSHRQETIGQKATAIAQSLEGKD
  D39V            MKRTGLFAKIFIYTFSIFSVLVICLHLAIYFLFPSTYLSHRQETIGQKATAIAQSLEGKD
  Hungary19A-6    MKRTGLFTKIFIYTFSIFSVLVICLHLAIYFLFPSTYLSHRQETIGQKATAIAQSLEGKD
  EF3030          MKRTGLFAKIFIYTFSIFSVLVICLHLAIYFLFPSTYLSHRQETIGQKATAIAQSLEGKD
                  *******:****************************************************
  
  TIGR4           RQSIEQVLDLYSQTSDIKGTVKGEMTEDKLEVKDSLPLDTDRQTTSLFIEEREVKTQDGG
  D39             RQSIEQVLDLYSQTSDIKGTVKGEMTEDKLEVKDSLPLDTDRQTTSLFIEEREVKTQDGG
  D39V            RQSIEQVLDLYSQTSDIKGTVKGEMTEDKLEVKDSLPLDTDRQTTSLFIEEREVKTQDGG
  Hungary19A-6    RQSIEQVLDLYSQTSDIKGTVKGEMTEDKLEVKDSLPLDTDRQTTSLFIEEREVKTQDGD
  EF3030          RQSIEQVLDLYSQTSDIKGTVKGEMTEDKLEVKDSLPLDTDRQTTSLFIEEREVKTQDGA
                  *********************************************************** 
  
  TIGR4           TMILQFLASMDLQKEAEQISLQFLPYTLLASFLISLLVAYIYARTIVAPILEIKRVTRRM
  D39             TMILQFLASMDLQKEAEQISLQFLPYTLLASFLISLLVAYIYARTIVAPILEIKRVTRRM
  D39V            TMILQFLASMDLQKEAEQISLQFLPYTLLASFLISLLVAYIYARTIVAPILEIKRVTRRM
  Hungary19A-6    TMILQFLASMDLQKEAEQISLQFLPYTLLASFLISLLVAYIYARTIVAPILEIKRVTRRM
  EF3030          TMILQFLASMDLQKEAEQISLQFLPYTLLASFLISLLVAYIYARTIVAPILEIKRVTRRM
                  ************************************************************
  
  TIGR4           MDLDSQVRLRVDSKDEIGNLKEQINSLYQHLLTVIADLHEKNEAILQLEKMKVEFLRGAS
  D39             MDLDSQVRLRVDSKDEIGNLKEQINSLYQHLLTVIADLHEKNEAILQLEKMKVEFLRGAS
  D39V            MDLDSQVRLRVDSKDEIGNLKEQINSLYQHLLTVIADLHEKNEAILQLEKMKVEFLRGAS
  Hungary19A-6    MDLDSQVRLRVDSKDEIGNLKEQINSLYQHLLTVIADLHEKNEAILQLEKMKVEFLRGAS
  EF3030          MYLDAQVRLRVDSKDEIGNLKEQINSLYQHLLTVIADLHEKNEAILQLEKMKVEFLRGAS
                  * **:*******************************************************
  
  TIGR4           HELKTPLASLKILIENMRENIGRYKDRDQYLGVALGIVDELNHHVLQILSLSSVQELRDD
  D39             HELKTPLASLKILIENMRENIGRYKDRDQYLGVALGIVDELNHHVLQILSLSSVQELRDD
  D39V            HELKTPLASLKILIENMRENIGRYKDRDQYLGVALGIVDELNHHVLQILSLSSVQELRDD
  Hungary19A-6    HELKTPLASLKILIENMRENIGRYKDRDQYLGVALGIVDELNHHVLQILSLSSVQELRDD
  EF3030          HELKTPLASLKILIENMRENIGRYKDRDQYLGVALGIVDELNHHVLQILSLSSVQELRDD
                  ************************************************************
  
  TIGR4           RETIDLLQMTQNLVKDYALLAKERELQIDNSLTHQQAYLNPSVMKLILSNLISNAIKHSV
  D39             RETIDLLQMTQNLVKDYALLAKERELQIDNSLTHQQAYLNPSVMKLILSNLISNAIKHSV
  D39V            RETIDLLQMTQNLVKDYALLAKERELQIDNSLTHQQAYLNPSVMKLILSNLISNAIKHSV
  Hungary19A-6    RETIDLLQMTKNLVKDYALLAKERELQIDNSLTHQQAYLNPSVMKLILSNLISNAIKHSV
  EF3030          RETIDLLQMTQNLVKDYALLAKERELQIDNSLTHQQAYLNPSVMKLILSNLISNAIKHSV
                  **********:*************************************************
  
  TIGR4           PGGLVRIGEREGELFIENSCSSEEQEKLAQSFSDNASRKVKGSGMGLFVVKSLLEHEKLA
  D39             PGGLVRIGEREGELFIENSCSSEEQEKLAQSFSDNASRKVKGSGMGLFVVKSLLEHEKLA
  D39V            PGGLVRIGEREGELFIENSCSSEEQEKLAQSFSDNASRKVKGSGMGLFVVKSLLEHEKLA
  Hungary19A-6    PGGLVRIGEREGELFIENSCSSEEQEKLAQSFSDNASRKVKGSGMGLFVVKSLLEHEKLA
  EF3030          PGGLVRIGEREGELFIENSCSSEEQEKLAQSFSDNASRKVKGSGMGLFVVKSLLEHEKLA
                  ************************************************************
  
  TIGR4           YRFEMEENSLTFFIDFPKVVQD
  D39             YRFEMEENRLTFFIDFPKVVQD
  D39V            YRFEMEENRLTFFIDFPKVVQD
  Hungary19A-6    YRFEMEENRLTFFIAFPKVAQD
  EF3030          YRFEMEENRLTFFIDFPKVAQD
                  ******** ***** ****.**